CX300486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 4.184e-42 Identity = 85/112 (75.89%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKLNGIALRVPTPN SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+ Sbjct: 290 KGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 401
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 2.077e-41 Identity = 84/112 (75.00%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKLNGIALRVPTPN SKKTFAEEVNAAFR+SA+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 285 KGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 396
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 4.626e-41 Identity = 83/112 (74.11%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKLNGIALRVPTPN SKKTFAEEVNAAFR++A+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 122 KGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 233
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 3.916e-40 Identity = 83/112 (74.11%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKLNGIALRVPTPN SKKTFAEEVN AFRESA EL GILSVCDEPLVSVDFRC MGDD+VKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 294 KGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNWK 405
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.053e-37 Identity = 77/112 (68.75%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 +G + LRVPTPN SKKTFAEEVNAAFRE+AD ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN WK Sbjct: 281 RGSSMALPLRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 392
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 6.913e-37 Identity = 77/112 (68.75%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKLNGIALRVPTPN SKKT AEEVN AFR++A NEL GIL VCD PLVSVDFRC MGDDMVKVI+WYDNEWGYSQRVVDLADI AN WK Sbjct: 292 KGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQRVVDLADICANQWK 403
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.224e-35 Identity = 74/112 (66.07%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 333 KGKLNGIALRVPTPN +KK AE+VNAAFR++AD LKG+L+VCDEPLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VANNW Sbjct: 280 KGKLNGIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANNW 391
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.082e-33 Identity = 72/112 (64.29%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 333 KGKLNGIALRVPTPN +KK AE+VNAAFR++A+ LKGIL VCD PLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VAN W Sbjct: 311 KGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW 422
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33 Identity = 68/111 (61.26%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 333 KGKLNGIALRVPTP KKTFAEEVNAAFRE+A+ +KG+L V D PLVS+DF+C MGDDMVKV+AWYDNEWGYSQRVVDLA++ A W Sbjct: 262 KGKLNGIALRVPTPTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAEVTAKKW 372
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 6.696e-32 Identity = 69/112 (61.61%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 333 KGKLNGIALRVPTPN KK AE+VN AFR++A+ +KGIL VCD PLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VA+ W Sbjct: 307 KGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKW 418 The following BLAST results are available for this feature:
BLAST of CX300486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300486 ID=CX300486; Name=CX300486; organism=Citrus clementina; type=EST; length=542bpback to top |