CX300489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAEB_NICSY (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris GN=PSAEB PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.350e-26 Identity = 52/61 (85.25%), Postives = 58/61 (95.08%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 KRG KV++LR+ESYWY G+GSVVAVDQDP +RYPVVVRFNKVNYANVSTNNYALDE+EEVK Sbjct: 83 KRGTKVRVLRKESYWYKGVGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVK 143
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_SPIOL (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea GN=PSAE-1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.424e-25 Identity = 52/60 (86.67%), Postives = 59/60 (98.33%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 252 KRG+KV+I+R+ESYWY G+GSVVAVDQDPK+RYPVVVRFNKVNYANVSTNNYALDEI+EV Sbjct: 65 KRGSKVRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQEV 124
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE2_ARATH (Photosystem I reaction center subunit IV B, chloroplastic OS=Arabidopsis thaliana GN=PSAE2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.173e-25 Identity = 52/61 (85.25%), Postives = 58/61 (95.08%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 KRG+KVKILR+ESYWY +GSVVAVDQDPK+RYPVVVRF KVNYAN+STNNYALDE+EEVK Sbjct: 85 KRGSKVKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 145
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAEA_NICSY (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris GN=PSAEA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25 Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 KRG KV+ILR+ESYWY G GSVVA DQDP +RYPVVVRFNKVNYANVSTNNYALDEIEEVK Sbjct: 81 KRGTKVRILRKESYWYKGTGSVVACDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 141
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE1_ARATH (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana GN=PSAE1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.575e-24 Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 252 KRG+KVKILRRESYW+ +GSVVAVDQDPK+RYPVVVRF KVNYAN+STNNYALDE+EEV Sbjct: 82 KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_HORVU (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare GN=PSAE PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24 Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 252 KRG KVKILRRESYWYNG GSVV VDQDP +RYPVVVRF KVNYA VSTNNYALDEI+EV Sbjct: 86 KRGTKVKILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIKEV 145
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_GLOVI (Photosystem I reaction center subunit IV OS=Gloeobacter violaceus GN=psaE PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.517e-16 Identity = 35/61 (57.38%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RGAKV+ILR+ESYWY +G+V +VD+ K+ YPV VRF KVNY+ ++TNN+ + E+EEV+ Sbjct: 4 ERGAKVRILRKESYWYREVGTVASVDKSEKTIYPVTVRFEKVNYSGINTNNFGVSELEEVE 64
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_THEEB (Photosystem I reaction center subunit IV OS=Thermosynechococcus elongatus (strain BP-1) GN=psaE PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.998e-16 Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 252 +RG+KVKILR ESYWYN +G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL E++EV Sbjct: 3 QRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_SYNEN (Photosystem I reaction center subunit IV OS=Synechococcus elongatus naegeli GN=psaE PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.998e-16 Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 252 +RG+KVKILR ESYWYN +G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL E++EV Sbjct: 3 QRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_CYAPA (Photosystem I reaction center subunit IV OS=Cyanophora paradoxa GN=psaE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 36/61 (59.02%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RG+KV+ILR+ESYWY IG+V ++DQ +YPV+VRF KVNY+NV++NN++LDE+ EV+ Sbjct: 3 QRGSKVRILRKESYWYQEIGTVASIDQSG-IKYPVIVRFEKVNYSNVNSNNFSLDEVVEVE 62 The following BLAST results are available for this feature:
BLAST of CX300489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300489 ID=CX300489; Name=CX300489; organism=Citrus clementina; type=EST; length=402bpback to top |