CX300505

Overview
NameCX300505
Unique NameCX300505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9479 contig Ccv1_Contig9479:237..938. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39
Identity = 92/185 (49.73%), Postives = 108/185 (58.38%), Query Frame = 3
Query:    3 TSVNVGKGGV--NVDAGKGMPXXXXXXXXXXXXXXXXXXXPDKRXXXXXXXXXXXXXXXXXXX--PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFST 545
            TSV VGKGGV  NV  G G P                     K                      PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P  +GE+K CATSLESM+DF+T
Sbjct:  120 TSVGVGKGGVGVNVQPGYGKPGGTTVGVGKGGVGVNVQPGYGKPGGTTVGVGKGGVGVNVKPRGKPVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFAT 304          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.361e-38
Identity = 90/192 (46.88%), Postives = 106/192 (55.21%), Query Frame = 3
Query:    3 TSVNVGKGGVNVDAGKGMPXXXXXXXXXXXXXXXXXXX-----PDKRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSN--GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFS 542
            T+VNVGKGGV VD GKG P                        P KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE   + GE+KYCATSLESM+DFS
Sbjct:   78 TAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFS 269          

HSP 2 Score: 30.0314 bits (66), Expect = 1.361e-38
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  620 AAGVKQMAADKSVVCHSR 673
            AAGVK+++ DKSVVCH +
Sbjct:  299 AAGVKKLSDDKSVVCHKQ 316          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 3
Query:  249 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFS 542
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE     GE K CATSLESM++F+
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFA 118          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 3
Query:  189 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDF 539
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P  KGE+K CATSLESM+DF
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDF 198          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 3
Query:  240 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFST 545
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P  KGE+K CATSLES++DF T
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVT 458          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = 3
Query:  201 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE----QKYCATSLESMIDF 539
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE   + GE    + YCATSLESM++F
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEF 158          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 3
Query:  225 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE-----QKYCATSLESMID 536
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE   I  E     + YCATSLESM++
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVE 160          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.452e-19
Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 3
Query:  225 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP--GIKGEQKYCATSLESMIDFS 542
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE    G + + K+C TSLESM++F+
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFA 190          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 3
Query:  261 TALFFLEKDLHPGMKMNLHFTQTSNGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMID 536
            T +FF E+ +  G ++  HF   +  A  FL RQ A S PF++  LP I   F +   S     M+ T++ CE P I GE K+CATSLE++++
Sbjct:  139 TTVFFHEEAVRVGRRLPFHFPPATPAALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVE 231          
BLAST of CX300505 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 3
Query:  261 TALFFLEKDLHPGMKMNLHF-TQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMID 536
            T +FF E+ +  G ++  +F   T++   FL R+ A S PF++  LP +   F V P + EA  M+ T++ CE P + GE K+CATSLE++++
Sbjct:  187 TTVFFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVE 279          
The following BLAST results are available for this feature:
BLAST of CX300505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
BURP3_ORYSJ1.477e-3949.73BURP domain-containing protein 3 OS=Oryza sativa s... [more]
RD22_ARATH1.361e-3846.88Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP6_ORYSJ2.799e-2254.08BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP5_ORYSJ2.799e-2247.86BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ4.041e-2151.89BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP1_ORYSJ3.421e-2046.15BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP2_ORYSJ4.468e-2047.71BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP8_ORYSJ6.452e-1948.62BURP domain-containing protein 8 OS=Oryza sativa s... [more]
RAF1B_WHEAT4.479e-1238.71Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURPD_ORYSJ5.849e-1237.63BURP domain-containing protein 13 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC07011A04SK SaltLeaf1 Citrus clementina cDNA clone C07011A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300505 ID=CX300505; Name=CX300505; organism=Citrus clementina; type=EST; length=701bp
GCACCTCTGTCAACGTAGGGAAGGGTGGTGTCAATGTGGATGCAGGGAAA
GGAATGCCCGGTGGTGGCACCCATGTGAATGTTGGGGGTAAGGGCGTTGG
TGTAAACACTGGAAAGCCTGACAAAAGAACCAGTGTTGGTGTTGGCAAAG
GAGGAGTATCCGTAAGTACAGGACACAAGGGAAAGCCAGTTTATGTTGGA
GTAAGCCCATTCAACTATGTATATGCTGCAAATGAGAACCAACTCCATGA
TGACCCGAATACAGCTCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGCA
TGAAGATGAACTTGCACTTCACTCAAACTTCAAATGGAGCAACTTTCTTA
TCTCGCCAAGCTGCCAAATCAACTCCTTTCTCGTCTGACAAATTGCCTGA
GATCTTTAACCAGTTTTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAA
TGCAGAACACAATCAAAGAGTGTGAAGACCCTGGCATTAAAGGAGAGCAG
AAATATTGTGCAACTTCACTGGAGTCAATGATTGACTTCAGCACTTTCTA
AGCTTGGAAAGAGTGTTCAGGCAATTTCTACGGAGGTAAAAAAGGAACCA
AGATGCAGACATATCAATCGCAGCTGGAGTGAAGCAGATGGCAGCTGACA
AATCAGTAGTGTGCCATAGCAGAACTATCCATATGCTGTATCTACTGCCA
T
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