CX300525

Overview
NameCX300525
Unique NameCX300525
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length330
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300525 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 3.284e-14
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 2 
Query:    2 SDTCGNCDCADRSQCVKKGSSYAAD 76
            SDTCGNCDCAD++QCVKKGSSY AD
Sbjct:    2 SDTCGNCDCADKTQCVKKGSSYTAD 26

HSP 2 Score: 42.743 bits (99), Expect = 3.284e-14
Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 1 
Query:  145 EGNCKCGPTCACVNCTCG 198
            +G CKCGP+C+C NCTCG
Sbjct:   47 DGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of CX300525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA3.284e-1488.00Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionC07011C04SK SaltLeaf1 Citrus clementina cDNA clone C07011C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300525 ID=CX300525; Name=CX300525; organism=Citrus clementina; type=EST; length=330bp
GTCGGACACCTGCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGA
AGAAGGGAAGCAGCTACGCTGCTGACTTTCGTCGAGACTGACTTGAGCTT
TGTCAGCACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCCTGAAGGT
AACTGCAAGTGCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAG
TCACTAAATAAGCAAACACATGCAGCAAAAAAATAAGAAGCCTGCAAGTG
TGCCTAAATATTGTGGGGGTTAAGAAACAATGTAAGGGTGAATAAAAAAA
AAAAAAAAAAACTCGAGGGGGGGGCCCGGT
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