CX300568

Overview
NameCX300568
Unique NameCX300568
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length468
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 8.186e-37
Identity = 77/100 (77.00%), Postives = 82/100 (82.00%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPAV GIMFLSGGQSEVEAT N NA+ Q PN W+VSFSYA A+QNTCL TW GRP NV AA  TLL RAKANSLA  GKYTG G S+EAK+GMFVKGYTY
Sbjct:  299 PPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 2.016e-35
Identity = 74/100 (74.00%), Postives = 81/100 (81.00%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPAV GIMFLSGGQSE+EAT N NA+ Q PN W+VSFSYA A+QNTCL TW G+  NV AA D LL RAKANSLA  GKYTG G S+EAK+GMFVKGYTY
Sbjct:  300 PPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.912e-34
Identity = 73/100 (73.00%), Postives = 79/100 (79.00%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPAV GIMFLSGGQSEVEAT N NA+ QGPN W+VSFSYA A+QNTCL TW G+P NV AA D LL RAKANSLA  GKYT  G + EAK+GMFVK Y Y
Sbjct:  289 PPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.036e-31
Identity = 69/100 (69.00%), Postives = 78/100 (78.00%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPAV GIMFLSGGQSEVEAT N NA+ + PN W+VSFSYA A+QNT L TW G P NV AA + LL RAK+NSLA  GKY G G S+EAKK +FVKGY+Y
Sbjct:  257 PPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.013e-31
Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPAV GIMFLSGGQSE EAT N NA+ Q PN W+VSFSYA A+QN+ L TW G+P  + A+   LL RAKANSLA  GKY+  G +++AKKGMFVKGYTY
Sbjct:  292 PPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.828e-28
Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPAV GIMFLSGGQSEVEAT N NA+ + PN W+VSFSYA A+QNT L TW G P NV AA + LL RAK+NSLA  GKY G G S+EAKK    +GY+Y
Sbjct:  251 PPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.356e-23
Identity = 60/95 (63.16%), Postives = 65/95 (68.42%), Query Frame = 3
Query:    6 PAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVK 290
            P V GIM LSGGQSEVEAT N NA+ Q PN W+VSFSYA A+QNTCL TW     NV A        AK+NSLA  GKYTG G S+E KK MFVK
Sbjct:  298 PVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVKAQD---FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.551e-19
Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQGPNS-WYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPA+ G++FLSGGQ+E+EAT N NA+   PN  W +SFSY  A+Q + + TW G   NV AA    L RAK NSLA  GKYTG   +  A + ++VK Y Y
Sbjct:  257 PPALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.313e-18
Identity = 53/99 (53.54%), Postives = 61/99 (61.62%), Query Frame = 3
Query:    6 PAVLGIMFLSGGQSEVEATFN*NALKQGPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            P V GIMFLSGGQSE+E+T N NA+ Q PN W+VSFSYA A+ NT L TW   P  V A       R KANS A  GKY      +EA +GM+ KG  Y
Sbjct:  275 PPVPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of CX300568 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.715e-18
Identity = 48/101 (47.52%), Postives = 66/101 (65.35%), Query Frame = 3
Query:    3 PPAVLGIMFLSGGQSEVEATFN*NALKQ-GPNSWYVSFSYA*AVQNTCLMTWCGRP*NVMAAHDTLLTRAKANSLAHFGKYTG*G*SQEAKKGMFVKGYTY 302
            PPA+ G++FLSGGQSE EA+ N N++   GP+ W ++FSY  A+Q + L TW G+  NV  A + LL RA+ANSLA +GKY G    + A   ++ K Y Y
Sbjct:  269 PPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369          
The following BLAST results are available for this feature:
BLAST of CX300568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ALFC2_ARATH8.186e-3777.00Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH2.016e-3574.00Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ2.912e-3473.00Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA1.036e-3169.00Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH3.013e-3166.00Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_PEA1.828e-2866.00Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_SPIOL1.356e-2363.16Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_DICDI1.551e-1950.50Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALFC_CHLRE1.313e-1853.54Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_PLAFA1.715e-1847.52Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]

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Properties
Property NameValue
Genbank descriptionC07011G07SK SaltLeaf1 Citrus clementina cDNA clone C07011G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300568 ID=CX300568; Name=CX300568; organism=Citrus clementina; type=EST; length=468bp
TCCCTCCGGCTGTCCTTGGAATCATGTTTTTGTCTGGTGGGCAATCTGAG
GTTGAGGCAACCTTTAACTAGAACGCTTTGAAGCAAGGTCCCAACTCATG
GTACGTATCTTTCTCTTATGCCTGAGCTGTCCAAAACACCTGCCTGATGA
CATGGTGTGGCAGGCCATAGAATGTCATGGCAGCTCATGATACTCTGCTC
ACCCGTGCCAAGGCCAACTCACTTGCTCATTTCGGCAAGTACACTGGCTA
GGGATAATCACAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCT
ACTAAATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAAT
GAGTAGTCATCTCAAATGTGTTAATGCTTTATAGCCGAGCTTTGGAGACT
ATTTTTAGGCATGATTACGTGTACTTTTATCAACTTAATAAACTTCTTGC
CAATGAGATGAGTTAGTG
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