CX300577

Overview
NameCX300577
Unique NameCX300577
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3887 contig Ccv1_Contig3887:635..1215. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX300577 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.924e-30
Identity = 59/93 (63.44%), Postives = 79/93 (84.95%), Query Frame = 3 
Query:    3 AEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQA 281
            AE EAE+KYL G+G+ARQRQAI DGLR+++L FS  V GTS+K+VMD++++TQYFDT+K++G SSK  +VFIPHGPG V+DI  QIR GL+++
Sbjct:   78 AEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMES 170
The following BLAST results are available for this feature:
BLAST of CX300577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO1.924e-3063.44Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionC07011H04SK SaltLeaf1 Citrus clementina cDNA clone C07011H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300577 ID=CX300577; Name=CX300577; organism=Citrus clementina; type=EST; length=581bp
GTGCTGAAGGAGAAGCAGAATCAAAGTATTTGGCAGGCCTTGGTATTGCA
CGTCAGCGTCAGGCCATTGTTGATGGCCTGAGGGATAGCGTGCTAGCCTT
CTCTGAGAATGTACCTGGAACATCTTCAAAGGATGTCATGGACATGGTTC
TGGTCACCCAGTATTTTGATACCATGAAGGAAATTGGTGCCTCCTCAAAG
ACTAACTCTGTGTTCATCCCCCATGGACCTGGTGCTGTCAAAGACATTGC
GTCGCAGATCAGGGAAGGTCTCCTTCAGGCCAATGCTACCATGTAGTGAG
CTTGTGCCACCTCAAAGTCAAAACTCTGTTTCATCCCACATGGAGCGGGG
GCTAATCTTCCAGTTTGGATATGTTTTTATTTAGCTTGAAGTTGTGAAGA
AGTTTCGTAATTGCCTGTAGTACCATCTAGCATATTATGGGAAAGAAGTT
TCTGTCATCAGGTAAATAAAGAATGGTAAATAATGGTAGATAAAGAGTGG
TAGATAACGTAATATACTTTGATCGTGCATGCAAATGTGAAACTTGAAGT
GTGCTGTAAAAAAAAAAAAAAAAAAAAAAAA
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