CX300636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300636 vs. ExPASy Swiss-Prot
Match: RS211_ARATH (40S ribosomal protein S21-1 OS=Arabidopsis thaliana GN=RPS21B PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.535e-22 Identity = 44/56 (78.57%), Postives = 53/56 (94.64%), Query Frame = 3 Query: 21 QDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 188 +DHA+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +QQ Sbjct: 27 KDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQQ 82
BLAST of CX300636 vs. ExPASy Swiss-Prot
Match: RS212_ARATH (40S ribosomal protein S21-2 OS=Arabidopsis thaliana GN=RPS21C PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.610e-21 Identity = 43/56 (76.79%), Postives = 53/56 (94.64%), Query Frame = 3 Query: 21 QDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 188 +DHA+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +Q+ Sbjct: 27 KDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQK 82
BLAST of CX300636 vs. ExPASy Swiss-Prot
Match: RS21_ORYSJ (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica GN=RPS21 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.507e-19 Identity = 41/56 (73.21%), Postives = 51/56 (91.07%), Query Frame = 3 Query: 21 QDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 188 +DHA+VQINIGHVD +G+Y G+F+TFAL GF+RAQGD DSA+DRLWQK+K EV+QQ Sbjct: 27 KDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82
BLAST of CX300636 vs. ExPASy Swiss-Prot
Match: RS21_MAIZE (40S ribosomal protein S21 OS=Zea mays GN=RPS21 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.385e-19 Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 3 Query: 21 QDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQ 185 +DHA+VQINIGH+DA+G+Y G F+TFAL GFVRAQGD DS++DRLWQKKK E++Q Sbjct: 27 KDHASVQINIGHLDANGLYDGHFTTFALSGFVRAQGDADSSLDRLWQKKKAEIKQ 81
BLAST of CX300636 vs. ExPASy Swiss-Prot
Match: RS21_CYAPA (40S ribosomal protein S21 OS=Cyanophora paradoxa GN=RPS21 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.781e-12 Identity = 31/48 (64.58%), Postives = 41/48 (85.42%), Query Frame = 3 Query: 24 DHAAVQINIGHVDAD-GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 164 DHAAVQIN+GHVD + G+YTG ++TFALCGFVR+ G+ D+A++RL K Sbjct: 28 DHAAVQINVGHVDPNSGLYTGDYTTFALCGFVRSMGESDAALNRLCVK 75
BLAST of CX300636 vs. ExPASy Swiss-Prot
Match: RS21_DICDI (40S ribosomal protein S21 OS=Dictyostelium discoideum GN=rps21 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.366e-11 Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = 3 Query: 21 QDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKK 167 +DHA+VQINIGHV+A+GIY G+ + FA CGF+R G D+A++RL Q+K Sbjct: 24 KDHASVQINIGHVNAEGIYNGEQTIFAFCGFLRNNGQSDAALNRLAQQK 72 The following BLAST results are available for this feature:
BLAST of CX300636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300636 ID=CX300636; Name=CX300636; organism=Citrus clementina; type=EST; length=414bpback to top |