CX305194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.417e-33 Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = -3 Query: 212 YDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD IKIHGF Sbjct: 12 FDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.851e-33 Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = -3 Query: 212 YDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD IKIHGF Sbjct: 12 FDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.124e-33 Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = -3 Query: 212 YDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFA+ + G K YVH+RVQQRNG+K LTTVQGLK+D+ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 12 FDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.386e-33 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 12 FDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.386e-33 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 12 FDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.386e-33 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 12 FDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 9.188e-33 Identity = 68/102 (66.67%), Postives = 80/102 (78.43%), Query Frame = -3 Query: 212 YDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD I+IHGF Sbjct: 12 FDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.200e-32 Identity = 68/104 (65.38%), Postives = 80/104 (76.92%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPF++ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 12 FDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.673e-32 Identity = 67/102 (65.69%), Postives = 81/102 (79.41%), Query Frame = -3 Query: 212 YDPFADIKDSLAPGD-KGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFA+ + + A G K YVH+R+QQRNG+K LTTVQGLK++ Y KILKDLKK CCNG VVNDK LGKVIQLQGD RKNV F+V++ IV KD+IK+H F Sbjct: 12 FDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FLV+ + D++K+HGF Sbjct: 10 FDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of CX305194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305194 ID=CX305194; Name=CX305194; organism=Citrus clementina; type=EST; length=516bpback to top |