CX305599

Overview
NameCX305599
Unique NameCX305599
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length485
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5662 contig Ccv1_Contig5662:779..1263. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP1_ARATH (Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.805e-30
Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = -2
Query:  122 VGMVVNKDFQAIGKGARAYTLGEGK-YYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKREQLPETEMPI 484
            +GM +  DF+ I + AR + +G    YYA++V + +IWQ FFLGAIG+++C             LPVTE+ AV+ ++EKFQAEKGVSL LSLWGF SYFYGE K+ KK+  + Q PETE+PI
Sbjct:  227 IGMFIVGDFKVIAREAREFKIGGSVFYYALIVITGIIWQGFFLGAIGIVFCASSLASGVLISVLLPVTEVFAVVCFREKFQAEKGVSLLLSLWGFVSYFYGEFKSGKKVVDKPQPPETELPI 348          
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP3_ARATH (Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.066e-29
Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = -2
Query:  131 VGMVVNKDFQAIGKGARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKN--NKKMKKREQLPETE 484
            +GM +  DF+A+ K AR + LGE  +Y V V SA+IWQ FFLGAIG+I+              LP+TE+LAVIFY EKFQAEKG+SLALSLWGF SYFYGEIK+  +K+  ++E+  ETE
Sbjct:  221 IGMFIAGDFKALPKEAREFKLGEALFYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPITEVLAVIFYHEKFQAEKGLSLALSLWGFVSYFYGEIKSGEDKRRIQQEESQETE 340          
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP2_ARATH (Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 7.905e-25
Identity = 63/133 (47.37%), Postives = 82/133 (61.65%), Query Frame = -2
Query:  131 VGMVVNKDFQA-----------IGKGARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKRE----QLPETE 484
            VGM+   DF+            I   AR + LGE  YY V+V +A+IWQ FF+GAIG+I+C             LPVT ILAVI ++EKFQA KGV+LALSLWG  SYFYG++K+ +K K ++    QLP T+
Sbjct:  223 VGMLAAGDFKVKHALFIFKNRVIAGEARDFKLGESLYYVVIVFTAIIWQAFFVGAIGLIFCASSLVSGIMVSALLPVTVILAVICFQEKFQAGKGVALALSLWGSVSYFYGQVKSEEKTKAQDTQLSQLPVTD 355          
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP9_ARATH (Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.386e-13
Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = -2
Query:  125 VGMVVNKDFQAIGKGARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKREQLPETEMP 484
            VG+  + +++ +      Y LG+  Y   +V +A+ WQ F +G  G+I+              LPV  ILAVI + +K    K +S+ L++WGF SY Y +  +   +KK  ++P TE P
Sbjct:  212 VGLFASSEWKTLSSEMENYKLGKVSYVMNLVWTAVTWQVFSIGCTGLIFELSSLFSNAISALGLPVVPILAVIIFHDKMNGLKVISMILAIWGFVSYVYQQYLDETNLKKSNEIPTTESP 331          
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP10_ARATH (Probable purine permease 10 OS=Arabidopsis thaliana GN=PUP10 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13
Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = -2
Query:  119 VGMVVNKDFQAIGKGARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKREQLPETEMPIP 484
            VG+  + +++ +      Y  G+  Y   +V +A+ WQ F +G  G+I+              LPV  ILAVI + +K    K +S+ L++WGF SY Y +  ++K +KK  ++  TE P P
Sbjct:  258 VGLFASSEWKTLSSEMDNYKHGKVSYIMNLVWTAVTWQVFSIGGTGLIFELSSLFSNAISVLGLPVVPILAVIIFHDKMNGLKVISMILAIWGFTSYVYQQYLDDKNLKKNHEITTTESPDP 379          
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP5_ARATH (Probable purine permease 5 OS=Arabidopsis thaliana GN=PUP5 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12
Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = -2
Query:  170 VGMVVNKDFQAIGKGARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNN 484
            +GMVV+ DFQ +   A+++  GE  Y  V+V SA+ +Q   LGA  V++              +P+T + AVI   +     K +SL L+ WGF+SY YG   +N
Sbjct:  247 IGMVVSNDFQGMSHEAKSFKGGESLYTQVLVWSAVTFQLGVLGATAVLFLASTVMAGVLNAVRVPITSVAAVILMHDPMSGFKILSLVLTFWGFSSYIYGSSSSN 351          
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP21_ARATH (Probable purine permease 21 OS=Arabidopsis thaliana GN=PUP21 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = -2
Query:  131 VGMVVNKDFQAIGKGARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKREQLPETE 484
            +G+  + +++ +    R Y LG+  Y   + ++A+ WQ + +G +G+I+              LP+  ++AVI + +K  A K  S+ L++WGF S+ Y    + KK+K  +  P  E
Sbjct:  255 IGLFASGEWRTLPSEMRNYKLGKVSYILTLASAAIFWQVYTVGCVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKMDASKIFSIILAIWGFLSFVYQHYLDEKKLKTCQTKPVEE 372          
BLAST of CX305599 vs. ExPASy Swiss-Prot
Match: PUP6_ARATH (Probable purine permease 6 OS=Arabidopsis thaliana GN=PUP6 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 6.496e-11
Identity = 31/118 (26.27%), Postives = 64/118 (54.24%), Query Frame = -2
Query:  131 VGMVVNKDFQAIGKGARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGXXXXXXXXXXXXLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNNKKMKKREQLPETE 484
            VG+  +  ++ +      + LG+  Y  + + S + WQ   +G++G+I               LPV  +LAV+F++++    K V++ L++WGF SY Y    N++K ++ ++LP+++
Sbjct:  255 VGLFGSGGWKKLSTEMEEFQLGKSSYILINIGSTISWQACLIGSVGLIIEVSSLFSNVISTLCLPVVPVLAVVFFRDEMSGIKLVAMFLAIWGFVSYGYQHYVNDRKPEEDQELPQSK 372          
The following BLAST results are available for this feature:
BLAST of CX305599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PUP1_ARATH2.805e-3051.64Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 ... [more]
PUP3_ARATH1.066e-2955.83Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 ... [more]
PUP2_ARATH7.905e-2547.37Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 ... [more]
PUP9_ARATH2.386e-1331.67Probable purine permease 9 OS=Arabidopsis thaliana... [more]
PUP10_ARATH9.065e-1331.15Probable purine permease 10 OS=Arabidopsis thalian... [more]
PUP5_ARATH3.445e-1235.24Probable purine permease 5 OS=Arabidopsis thaliana... [more]
PUP21_ARATH2.233e-1127.12Probable purine permease 21 OS=Arabidopsis thalian... [more]
PUP6_ARATH6.496e-1126.27Probable purine permease 6 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionC18007F12Rv Drought1 Citrus clementina cDNA clone C18007F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305599 ID=CX305599; Name=CX305599; organism=Citrus clementina; type=EST; length=485bp
TTTTTTTTTTTTTTTTTTTTTTTCATAGTAATCATAAATAATTCATATCG
AAATAAAACTTACTATGGTAGCTAGCCAATTAACGGCATTCCAATGGTTA
AACTAGTTATCATGGATTAGGAATTGGCATTTCTGTTTCTGGAAGTTGCT
CCCGCTTCTTCATCTTCTTATTGTTTTTAATCTCACCATAGAAATACGAA
GCAAATCCCCAAAGCGAAAGTGCAAGAGAGACTCCCTTTTCAGCTTGAAA
TTTTTCTTTGTAGAAAATGACTGCTAGAATCTCGGTAACTGGTAGCAGAA
CTGCGATTATGATTGCGGAGAGCAAAGACGAGCCACAGTAAATGACTCCA
ATAGCCCCTAAGAAGAAGCACTGCCAAATTAATGCACTCGCCACCACCAC
CGCATAGTACTTGCCTTCGCCTAGCGTGTACGCTCTTGCTCCTTTTCCAA
TTGCCTGGAAATCTTTGTTGACGACCATTCCCACG
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