CX305606

Overview
NameCX305606
Unique NameCX305606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length353
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX305606 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.277e-15
Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = -2
Query:    8 IVSAIWGAGDAGVSLHG-GRNGYCPLNVIQLPSDMQNGIELTLSPYNN--STIVPESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGQDGHPVVETSINWFKLDIIG 352
            +VSAIWGAG  G++++G G    CPL+V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG+ G+   E++ + FK+   G
Sbjct:   22 VVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG 132          
BLAST of CX305606 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.973e-15
Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = -2
Query:    8 IVSAIWGAGDAGVSLHGGRNGYCPLNVIQLPSDMQNGIELTLSPYNNST-IVPESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGQDGHPVVETSINWFKLDIIG 352
            ++S+I GAG  G++L       CP  V+Q  SD+ NG  +  S  ++   +V  STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G  G P   T  +WFK++  G
Sbjct:   47 VLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG 160          
The following BLAST results are available for this feature:
BLAST of CX305606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LSPI_CARPA2.277e-1539.83Latex serine proteinase inhibitor OS=Carica papaya... [more]
ASP_THECC2.973e-1536.7521 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionC18007G07Rv Drought1 Citrus clementina cDNA clone C18007G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305606 ID=CX305606; Name=CX305606; organism=Citrus clementina; type=EST; length=353bp
GAGAATCTCCAATTATGTCAAGCTTAAACCAATTTATCGAAGTTTCAACT
ACGGGATGACCATCCTGACCCCCGGTTGTTATAAACCATTTGCCTGATGC
AGCGTCATAATTATCAACTTTCCACAACGGTTGTTCGTTACAATAGTCAC
GTCCAGATAGCAACACTGAGAATCTCAGGTTGAGATCAGTGGATTCTGGG
ACAATTGTAGAATTGTTATACGGTGACAGTGTTAATTCGATTCCATTTTG
CATATCAGAAGGTAATTGGATAACGTTCAGCGGACAATATCCGTTTCTGC
CACCGTGTAGGCTAACTCCAGCATCGCCAGCTCCCCATATGGCTGAGACT
ATA
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