CX305616

Overview
NameCX305616
Unique NameCX305616
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length495
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX305616 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.944e-19
Identity = 50/154 (32.47%), Postives = 84/154 (54.55%), Query Frame = 3
Query:   39 ATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPEAETLLNWF 494
            AT +  L+ A  S S      ++   P+LD  G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G P   TL +WF
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWF 154          
BLAST of CX305616 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 51/158 (32.28%), Postives = 79/158 (50.00%), Query Frame = 3
Query:   30 ISLATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPEAETLLNWF 494
            +SL+      +LA A+N LL     S P P+LD+ G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+P  ET+ +WF
Sbjct:    7 LSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWF 161          
BLAST of CX305616 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.208e-12
Identity = 45/131 (34.35%), Postives = 65/131 (49.62%), Query Frame = 3
Query:  111 PEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPEAETLLNWF 494
            P+P++D+ G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+   E+  + F
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMF 126          
The following BLAST results are available for this feature:
BLAST of CX305616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC8.944e-1932.4721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.865e-1632.28Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA6.208e-1234.35Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionC18007H10Rv Drought1 Citrus clementina cDNA clone C18007H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305616 ID=CX305616; Name=CX305616; organism=Citrus clementina; type=EST; length=495bp
GCGGGAGCTTTGAAAACAACAAAATGAAGATTTCATTAGCAACAACACTC
TCTTTCCTTATCCTTGCCTTGGCCTCAAACTCTTTGTTGGTCTTGGGCAC
CTCATCAGTTCCTGAACCTCTCCTTGATGTCCACGGAAACAAGGTCGAAT
CCACCCTTAAGTACTACATAGTCTCAGCCATCTGGGGAGCTGGCGGTGGT
GGAGTTAGCCTACACGGTGGCAGAAACGGATATTGTCCGCTGGACGTTAT
CCAGTTACCTTCTGATATGCAAAATGGAATCGAATTAACACTGTCACCGT
ATAACAATTCTACAATTGTCCGAGAATCCACTGATCTCAACTTGAGATTC
TCAGTGTTGCTATCTGGACGTGACTATTGTAACGAACAACCGTTGTGGAA
AGTTGATAATTATGACGCGGCATCAGGCAAATGGTTTATAACAACCGGGG
GACTTGATGGTCACCCTGAAGCTGAAACTTTGCTAAATTGGTTTA
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