CX306378

Overview
NameCX306378
Unique NameCX306378
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length534
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10111 contig Ccv1_Contig10111:527..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306378 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.609e-30
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = -2
Query:   75 IVSAIWGADGGGVSLHGGRNGYCPLDVIQLPSAIQWGKKLVLSPYDNST-IVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGVYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVL 533
            ++S+I GA GGG++L       CP  V+Q  S +  G  ++ S  D+   +VR STD+N+ FV +    + C+   +W++DNYD S+G+W++TT G+ G PG  TL +WFK+EK  + G YK   CPSVC+SC  LCS +GR S +DG  RL L
Sbjct:   47 VLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD--RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG-YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX306378 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 8.003e-22
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = -2
Query:   57 GGGVSLHGGR-NG--YCPLDVIQLPSAIQWGKKLVLSPYD-NSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGVYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEP 506
            GGG+++     NG   CP  V+Q    +   + L   P +    +VR STDLN+ F   +    +     +W++D YD S+G++F+T GG+ G+PG ET+ +WFK+E+    G YK+V CP+VC SC   C  VG +  + G RRL L   D+P
Sbjct:   60 GGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC--RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
BLAST of CX306378 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.041e-21
Identity = 62/159 (38.99%), Postives = 89/159 (55.97%), Query Frame = -2
Query:   66 IVSAIWGADGGGVSLHG-GRNGYCPLDVIQLPSAIQWGKKLVLSPYDN--STIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGVYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 533
            +VSAIWGA GGG++++G G    CPL V+Q P     G+ ++ S   N    IV ES DLN++F   ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K  LP  YK   CPS   + +  C++V  F  +  +RRL+L  D
Sbjct:   22 VVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDP--FDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX306378 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.787e-13
Identity = 60/173 (34.68%), Postives = 82/173 (47.40%), Query Frame = -2
Query:   18 IVSAIWGADGGGVSLHGGRNGYCPLDVIQLPSAIQWGKKL-VLSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGVYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFPVVLIPARERS 533
            IVSAI GA GGGV     R   CP+ +IQ  S +Q G  +   SP ++   +   T+L + FV        C E   W +      SG   +  GG + HP  E +  +FK+EK      YK+V CP   +S    CS +G  ++E G R LVL   D+  F VV +  R  S
Sbjct:   22 IVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFV----EKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLG-SLAYKLVFCP---KSSSGSCSDIG-INYE-GRRSLVLKSSDDSPFRVVFVKPRSGS 181          
BLAST of CX306378 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11
Identity = 53/162 (32.72%), Postives = 79/162 (48.77%), Query Frame = -2
Query:   63 IVSAIWGADGGGVSLHGGRNGYCPL--DVIQLPSAIQWGKKLVLSPYDNSTI---VRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGVYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDD 533
            I+S  WGA GG V L    N   P    + +  S +      V     +S     + E+  LN++F   +S SK C    +WKV +YDAS G   + TGG  G   +    +WFK+ K++  G Y +++CP    S  + CS VG    ++G RRL LV ++
Sbjct:   24 IISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFA--ISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG-YNLLYCPVTSSSDDQFCSKVG-VVHQNGKRRLALVNEN 177          
BLAST of CX306378 vs. ExPASy Swiss-Prot
Match: ICI2_CANLI (Subtilisin inhibitor CLSI-II OS=Canavalia lineata PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.866e-11
Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = -2
Query:   30 IVSAIWGADGGGVSLHGGRNGYCPLDVIQLPSAIQWGKKLVLS-PYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLP-GVYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFPVVLIPA 533
            I+ AIWG  GGGV L   RN  CP+ V+Q    + +G+ +  + P   S ++  +T +   F+       +C     W V   D    +  +  GG + HPG +     F ++K+  P   YK+V     CES    CS +GR+   +G RRL+L   +   F VV + A
Sbjct:   22 IMPAIWGPPGGGVRLAKTRNSDCPVTVLQDYGEVIFGQPVKFTLPGRGSGLIITNTPVE-EFI----KKPECASSSKWSV-FVDDEIEKACVGIGGHEDHPGEQVFSGTFTIQKSRTPYNSYKLV----FCESDSSTCSDIGRYDNNEGGRRLILTHHN--PFQVVFMDA 179          
The following BLAST results are available for this feature:
BLAST of CX306378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ASP_THECC1.609e-3043.5121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU8.003e-2237.66Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA3.041e-2138.99Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE1.787e-1334.68Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPI2_SOLTU3.726e-1132.72Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
ICI2_CANLI4.866e-1130.59Subtilisin inhibitor CLSI-II OS=Canavalia lineata ... [more]
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Properties
Property NameValue
Genbank descriptionC18017D06Rv Drought1 Citrus clementina cDNA clone C18017D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306378 ID=CX306378; Name=CX306378; organism=Citrus clementina; type=EST; length=534bp
ATTGATTACACAGACGTCGATCTTTCTCTAGCTGGAATTAACACAACAGG
AAAAGCCGGCTCATCATCACGAACCAGAACCAGACGTCGAACGCCATCCT
CAAACGAAAAGCGGCCAACGCTGCTGCAGAGTTTGACGCAAGACTCGCAA
ACAGATGGACAATGAACAATTTTGTATACACCTGGTAGATTAGTTTTCTC
AAGCTTAAACCAATTTAGCAACGTTTCAGCTCCAGGGTGACCATCAAGTC
CCCCGGTTGTTATAAACCATCTGCCTGATGAGGCGTCATAGTTATCAACT
TTCCACAACGGTAGCTCGTTACATTGCTTACTTCCAGATAGTAACCCTAC
GAATCTCAAGTTGAGATCAGTGGATTCTCTGACAATTGTAGAATTGTCAT
ATGGTGACAGTACTAATTTCTTTCCCCATTGGATAGCAGAAGGTAATTGG
ATAACATCCAACGGACAGTATCCGTTTCTGCCTCCGTGTAGGCTAACTCC
ACCGCCGTCAGCTCCCCAGATGGCTGAGACTATA
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