CX307877

Overview
NameCX307877
Unique NameCX307877
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length401
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX307877 vs. ExPASy Swiss-Prot
Match: PDIA6_MEDSA (Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.638e-18
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 3 
Query:    3 EGSTARHGKIYLKVAKNYMDKGSDYAKKEIDRLQRMLDKSISAAKADEFVLKKNILSTF 179
            EGS +R+GKIYLKV+K Y++KGSDYAK EI RL+R+L+KSIS AKADE  LKKNILST+
Sbjct:  305 EGSASRYGKIYLKVSKKYLEKGSDYAKNEIQRLERLLEKSISPAKADELTLKKNILSTY 363
[Close]
BLAST of CX307877 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.416e-16
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 3 
Query:    3 EGSTARHGKIYLKVAKNYMDKGSDYAKKEIDRLQRMLDKSISAAKADEFVLKKNILSTF 179
            +GST R+GK+YLK+AK+Y++KGSDYA KE +RL R+L KSIS  KADE  LK+NIL+TF
Sbjct:  299 KGSTTRYGKLYLKLAKSYIEKGSDYASKETERLGRVLGKSISPVKADELTLKRNILTTF 357
The following BLAST results are available for this feature:
BLAST of CX307877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PDIA6_MEDSA1.638e-1872.88Probable protein disulfide-isomerase A6 OS=Medicag... [more]
PDIA6_ARATH3.416e-1666.10Probable protein disulfide-isomerase A6 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionC20003B06SK OF2 Citrus clementina cDNA clone C20003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307877 ID=CX307877; Name=CX307877; organism=Citrus clementina; type=EST; length=401bp
TTGAGGGTTCCACTGCCAGGCATGGGAAGATTTACTTGAAAGTTGCAAAG
AACTATATGGACAAAGGGAGTGATTATGCGAAGAAGGAAATTGATCGCCT
CCAGCGTATGCTTGACAAGTCAATCAGCGCGGCAAAAGCGGACGAATTCG
TCCTCAAGAAAAATATTTTATCCACATTCACTTAATATGTGGGATTATGT
TTTTTTATTCATCTCAAATTGGGCTGGGGTTACCTATAAGTCGACTTTAT
GGAGATTGATGGACCACAGCCATCTGATGTTGCTGTGAATTTATTTGAGC
AGAGCTTCTTTTAACGGGGAAAGATCTTGAGGTCTCAGACATAAATGACC
ACATATGATGAAACTTGTGTTAAGAGAAGTACAATTAGGTAGTGTAATGA
T
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