CX307988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.028e-16 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 92 LCAVNVILATVRMAVTLAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 LC V ++ T A + I++ D+F ++L + D+ C A GFYTYDAFI A +FP FG +G++T RK+EIAAFF QT Sbjct: 3 LCCVFLLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQT 81
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.708e-16 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 95 CAVNVILATVRMAVTLAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 C V + T +A + I++ D+F ++L + D C A GFYTYDAFI A +FP FG SG++T R++EIAAFF QT Sbjct: 12 CCVFFLFLTGSLAQGIGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQT 89
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 65 VQHRIVEP-ALCAVNVILATVRMAVTLAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 ++ IV P AL + + T +A I++ ++FE +L ++ ++ C A GFYTYDAFI A +FP FG +G++T RK+EIAAFF QT Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQT 89
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 65 VQHRIVEP-ALCAVNVILATVRMAVTLAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 ++ IV P AL + + T +A I++ ++FE +L ++ ++ C A GFYTYDAFI A +FP FG +G++T RK+EIAAFF QT Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQT 89
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 95 CAVNVILATVRMAVTLAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 C V + T +A + I++ D+F ++L + D C A GFYTYDAFI A +FP FG +G++T R++EIAAFF QT Sbjct: 12 CCVFFLFLTGSLAQGIGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQT 89
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 4.996e-15 Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 140 LAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 L+ II MF+D+L Y+ D C A GFYTY+AFI A + FP FGN+G++ MRKREIAAF QT Sbjct: 85 LSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQT 147
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.996e-15 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 2 Query: 140 LAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 L IIS MF+ +L ++ D C GFY+Y+AFI A ++FP FG SG+ T RKREIAAFFAQT Sbjct: 75 LGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQT 137
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 4.996e-15 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 2 Query: 140 LAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 L IIS MF+ +L ++ D C GFY+Y+AFI A ++FP FG SG+ T RKREIAAFFAQT Sbjct: 80 LGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQT 142
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 89 ALCAVNVILATVRMAVTLAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 AL V + T +A + I++ D+F+ +L + D C A FYTYDAFI A +FP FG +G++T RK+EIAAFF QT Sbjct: 9 ALSFVVFLFLTGTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQT 88
BLAST of CX307988 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14 Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 89 ALCAVNVILATVRMAV-----TLAKIISGDMFEDLLPYKTDEPCHAGGFYTYDAFIEATQAFPAFGNSGNETMRKREIAAFFAQT 328 +L V ++ATV MA+ +++ IIS F+ +L ++ D C A GFYTYDAF+ A AFP FG +G+ RKR++AAF AQT Sbjct: 3 SLAVVVAVVATVAMAIGTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87 The following BLAST results are available for this feature:
BLAST of CX307988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307988 ID=CX307988; Name=CX307988; organism=Citrus clementina; type=EST; length=364bpback to top |