CX308508

Overview
NameCX308508
Unique NameCX308508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX308508 vs. ExPASy Swiss-Prot
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 3 
Query:  258 AAGLIHTLLPAIRVGLAFLVMLTIMSFKGCVFLVAVAGHTFGFLIFGSRVF 410
            AAGLI T +  +R+GLA+LVML +MSF   VFLVA+AGH  GF++FGS+ F
Sbjct:  101 AAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTF 151
The following BLAST results are available for this feature:
BLAST of CX308508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
COPT1_ARATH8.954e-1160.78Copper transporter 1 OS=Arabidopsis thaliana GN=CO... [more]
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Properties
Property NameValue
Genbank descriptionC20010G05SK OF2 Citrus clementina cDNA clone C20010G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308508 ID=CX308508; Name=CX308508; organism=Citrus clementina; type=EST; length=629bp
GGACTATTCTAATGGCCTTATGAACTTGCATCATATAACTGGAGATAATG
TTTATCCAACAGCTACACAAAATTCTAGCACGCACCCACAACTCCAGCCC
CAAGTGCATGGACATTTTCAGCAGCTGCTTTTTCATCAAAATAATGAATA
TGGAGTTAATAGGGAGTTTGGAAGTGATTTCGAAGAATAACATTTTCGGT
GCAATAATTGAGCATGTATCAGTTTGATATATAGACTATTTATCCGCTAG
TCATGTGGCTGCTGGTTTGATTCACACTCTTTTACCTGCAATCAGGGTTG
GACTTGCTTTCTTGGTGATGCTTACTATTATGTCCTTTAAAGGATGTGTG
TTTTTGGTGGCTGTTGCTGGTCATACTTTTGGATTTTTAATTTTTGGCAG
CAGGGTTTTTTATAAATCACACCCCCTCCATGAGCTGTTGATACAATTAA
TGGCTGATTACTAACAGTTAAGTATGTTCTTGAGTTTGGCTTGTGAGTTT
ATCTTGTAACTCTTAATTTCTGTCGAAACTGAATATGAGAAATTTAATTG
CATATGATGATGATTTTCAGTTTCTGGATTTGAGAAATTTAATTGCATAT
GTTGCAAACGTGGTTATGCGGAAGAGAAA
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