CX308896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS202_ARATH (40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18 Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS Sbjct: 79 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 122
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS201_ARATH (40S ribosomal protein S20-1 OS=Arabidopsis thaliana GN=RPS20A PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18 Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS Sbjct: 81 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_ORYSJ (40S ribosomal protein S20 OS=Oryza sativa subsp. japonica GN=RPS20 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 3.473e-15 Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = -2 Query: 314 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 442 TWDRFE+RVHKRVIDL SS DVVKQITSITIEPGVEVEVTI+D Sbjct: 85 TWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISD 127
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_XENLA (40S ribosomal protein S20 OS=Xenopus laevis GN=rps20 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRF++R+HKR+IDL S ++VKQITSI+IEPGVEVEVTIAD+ Sbjct: 76 TWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_RAT (40S ribosomal protein S20 OS=Rattus norvegicus GN=Rps20 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRF++R+HKR+IDL S ++VKQITSI+IEPGVEVEVTIAD+ Sbjct: 76 TWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_PONAB (40S ribosomal protein S20 OS=Pongo abelii GN=RPS20 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRF++R+HKR+IDL S ++VKQITSI+IEPGVEVEVTIAD+ Sbjct: 76 TWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_MOUSE (40S ribosomal protein S20 OS=Mus musculus GN=Rps20 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRF++R+HKR+IDL S ++VKQITSI+IEPGVEVEVTIAD+ Sbjct: 76 TWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_MACFA (40S ribosomal protein S20 OS=Macaca fascicularis GN=RPS20 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRF++R+HKR+IDL S ++VKQITSI+IEPGVEVEVTIAD+ Sbjct: 76 TWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_HUMAN (40S ribosomal protein S20 OS=Homo sapiens GN=RPS20 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRF++R+HKR+IDL S ++VKQITSI+IEPGVEVEVTIAD+ Sbjct: 76 TWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
BLAST of CX308896 vs. ExPASy Swiss-Prot
Match: RS20_BOVIN (40S ribosomal protein S20 OS=Bos taurus GN=RPS20 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 311 TWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 442 TWDRF++R+HKR+IDL S ++VKQITSI+IEPGVEVEVTIAD+ Sbjct: 76 TWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119 The following BLAST results are available for this feature:
BLAST of CX308896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308896 ID=CX308896; Name=CX308896; organism=Citrus clementina; type=EST; length=446bpback to top |