CX309058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.565e-25 Identity = 55/82 (67.07%), Postives = 67/82 (81.71%), Query Frame = -3 Query: 70 PVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 315 P+ I++ YDE+SPTALIV+G+ NAA+AGILIYMSLVDLLAADF +PKMQ+N LQ A+++LLLGAG MSLLAKWA Sbjct: 258 PIGIVVGMGIANSYDESSPTALIVQGVLNAASAGILIYMSLVDLLAADFTHPKMQSNTGLQIMAHIALLLGAGLMSLLAKWA 339 HSP 2 Score: 25.7942 bits (55), Expect = 5.565e-25 Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = -1 Query: 306 KFKSRGVAILALFFSLTTQLG 368 KFK V I++ FF++TT +G Sbjct: 240 KFKCLSVTIMSTFFAITTPIG 260
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 6.466e-25 Identity = 58/82 (70.73%), Postives = 68/82 (82.93%), Query Frame = -3 Query: 70 PVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 315 PV ISS YD++SPTALIV+G+ NAA+AGILIYMSLVD LAADFM+PKMQ+N RLQ A++SLL+GAG MSLLAKWA Sbjct: 279 PVGIAVGMAISSSYDDSSPTALIVQGVLNAASAGILIYMSLVDFLAADFMHPKMQSNTRLQIMAHISLLVGAGVMSLLAKWA 360
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.862e-18 Identity = 42/72 (58.33%), Postives = 57/72 (79.17%), Query Frame = -3 Query: 70 SSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 285 S+VY +NSP ALI G+ NA +AG+LIYM+LVDLLAA+FM PK+Q + ++QF ++ LLG G MS++AKWA Sbjct: 268 STVYQDNSPKALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKMQFKCLIAALLGCGGMSIIAKWA 339
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.729e-18 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = -3 Query: 70 PVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 315 P+ ++ +Y+ENSP AL V G NA A+GILIYM+LVDL+A FMN K Q++ ++Q +VSL++GAG MSLLA WA Sbjct: 274 PIGIGIGIGVAEIYNENSPMALKVSGFLNATASGILIYMALVDLVAPLFMNQKTQSSMKIQVACSVSLVVGAGLMSLLAIWA 355 HSP 2 Score: 23.8682 bits (50), Expect = 6.729e-18 Identity = 8/22 (36.36%), Postives = 16/22 (72.73%), Query Frame = -1 Query: 306 AKFKSRGVAILALFFSLTTQLG 371 AKF+ + + ++ +FF+LT +G Sbjct: 255 AKFRVKKIWVMLMFFALTAPIG 276
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.998e-18 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = -3 Query: 70 YDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 276 Y + S A++VEG+ NAA+AGILIYMSLVDLLA DFMNP++Q+N L A +SL+LGAG MSLLA WA Sbjct: 287 YRKESKEAIMVEGMLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIWA 355
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP10_ARATH (Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 2.227e-17 Identity = 43/72 (59.72%), Postives = 56/72 (77.78%), Query Frame = -3 Query: 70 SSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 285 S Y ENSP +LI G+ NA++AG+LIYM+LVDLLAADFM KMQ + +LQ + ++LLGAG MS++AKWA Sbjct: 293 SKTYKENSPESLITVGLLNASSAGLLIYMALVDLLAADFMGQKMQRSIKLQLKSYAAVLLGAGGMSVMAKWA 364
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.246e-17 Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = -3 Query: 70 SSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 285 +S ++ +SP AL+ EGI ++ +AGIL+YM+LVDL+AADF++ +M N RLQ + V L LGAG MS LA WA Sbjct: 303 ASSFNSHSPGALVTEGILDSLSAGILVYMALVDLIAADFLSKRMSCNLRLQVVSYVMLFLGAGLMSALAIWA 374 HSP 2 Score: 28.1054 bits (61), Expect = 3.246e-17 Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = -1 Query: 306 AKFKSRGVAILALFFSLTTQLG 371 A+F+++ I+A FF+LTT LG Sbjct: 274 AQFRNKSATIMACFFALTTPLG 295
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.105e-16 Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = -3 Query: 70 SSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 285 SSVY +NSPTALI G+ NA +AG+LIYM+LVDLLAA+FM +Q + +LQ + LLG G MS+LAKWA Sbjct: 276 SSVYKDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGSMLQRSVKLQLNCFGAALLGCGGMSVLAKWA 347
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.565e-16 Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = -3 Query: 70 PVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 315 P+ ++S ++ +S AL+ EGI ++ +AGIL+YM+LVDL+AADF++ KM+ N RLQ + V L LGAG MS LA WA Sbjct: 308 PIGIGIGTAVASSFNSHSVGALVTEGILDSLSAGILVYMALVDLIAADFLSTKMRCNFRLQIVSYVMLFLGAGLMSSLAIWA 389 HSP 2 Score: 27.335 bits (59), Expect = 1.565e-16 Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = -1 Query: 306 AKFKSRGVAILALFFSLTTQLG 371 A+F+++ I+A FF+LTT +G Sbjct: 289 AQFRNKSATIMACFFALTTPIG 310
BLAST of CX309058 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.723e-15 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = -3 Query: 70 VYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 279 +YDE SPTALIV G+ NA +AG+LIYM+LV+LLA +F PK+Q N +L V+ GA MSL+AKWA Sbjct: 296 IYDETSPTALIVVGVLNACSAGLLIYMALVNLLAHEFFGPKIQGNIKLHVLGYVATFTGAAGMSLMAKWA 365 The following BLAST results are available for this feature:
BLAST of CX309058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309058 ID=CX309058; Name=CX309058; organism=Citrus clementina; type=EST; length=449bpback to top |