DY256624

Overview
NameDY256624
Unique NameDY256624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length512
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: NCPR_BOVIN (NADPH--cytochrome P450 reductase OS=Bos taurus GN=POR PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14
Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 273
            VAFSR+QPQKVYVQH + +  + +W L+    A IYV G A  M  DV +TF +IV+++G      A +++K L   GRY ++ WS
Sbjct:  593 VAFSREQPQKVYVQHLLKKDKEHLWKLIHEGGAHIYVCGDARNMARDVQNTFYDIVAEQGAMEHAQAVDYVKKLMTKGRYSLDVWS 678          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: NCPR_PIG (NADPH--cytochrome P450 reductase OS=Sus scrofa GN=POR PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 9.398e-14
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 273
            VAFSR+QPQKVYVQH +    + +W L+    A IY+ G A  M  DV +TF +IV+++G      A +++K L   GRY ++ WS
Sbjct:  593 VAFSREQPQKVYVQHLLKRDKEHLWKLIHDGGAHIYICGDARNMARDVQNTFCDIVAEQGPMEHAQAVDYVKKLMTKGRYSLDVWS 678          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: NCPR_HUMAN (NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 273
            VAFSR+Q  KVYVQH + +  + +W L+   A IYV G A  M  DV +TF +IV++ G      A +++K L   GRY ++ WS
Sbjct:  593 VAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 677          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: NDOR1_DANRE (NADPH-dependent diflavin oxidoreductase 1 OS=Danio rerio GN=ndor1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 1
Query:   22 AFSRKQPQKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 273
            AFSR Q  KVYVQH++ EQ + +W+L+  K A  Y+AG+A +MP+ V    + +  KEG  S + A   L  +++ GR+  E WS
Sbjct:  511 AFSRDQEDKVYVQHRVKEQGKLLWDLIAKKNAFFYIAGNAKQMPTSVCDALKAVFQKEGGMSENQAQEMLDGMEKNGRFQSETWS 595          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: NCPR_RABIT (NADPH--cytochrome P450 reductase OS=Oryctolagus cuniculus GN=POR PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 273
            VAFSR+Q QKVYVQH +    + +W L+    A IYV G A  M  DV +TF +IV++ G      A +++K L   GRY ++ WS
Sbjct:  594 VAFSREQAQKVYVQHLLRRDKEHLWRLIHEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYVKKLMTKGRYSLDVWS 679          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio parahaemolyticus GN=cysJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 270
            VAFSR Q +KVYVQH++LE + ++W  +   A IYV G AT+M  DV      +  +EG+  RD A  ++  L++A RY  + +
Sbjct:  540 VAFSRDQVEKVYVQHRILENAAQVWQWIQDGAYIYVCGDATRMAKDVHDALVIVAEQEGKMPRDDAEQFINDLRKAKRYQRDVY 623          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBVU (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio vulnificus GN=cysJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12
Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 270
            VAFSR Q +KVYVQ ++LE + ++W  +   A +YV G A +M  DV   F  +  +EG+ SRD A  ++  L++A RY  + +
Sbjct:  533 VAFSRDQAEKVYVQQRILENAAQVWQWIQEGAYLYVCGDANRMAKDVHQAFVAVAEQEGKMSRDDAEEFINDLRKAKRYQRDVY 616          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBF1 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=cysJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 270
            VAFSR Q +KVYVQH++LE + ++W  L   A IYV G AT+M  DV      +V + G+ +R+ A  ++  L++A RY  + +
Sbjct:  521 VAFSRDQQEKVYVQHRILEHAAQVWQWLQDGAYIYVCGDATRMAKDVHEALICVVEQHGQKTREEAEQFVNELRKAKRYQRDVY 604          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: NCPR_MOUSE (NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 273
            VAFSR+Q  KVYVQH +    + +W L+    A IYV G A  M  DV +TF +IV++ G      A +++K L   GRY ++ WS
Sbjct:  593 VAFSREQAHKVYVQHLLKRDKEHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVWS 678          
BLAST of DY256624 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio cholerae GN=cysJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 1
Query:   19 VAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 270
            VAFSR Q +KVYVQH++LEQ++ +W  L   A  YV G A++M  DV      +V ++G  +R+ A  ++  L++A RY  + +
Sbjct:  531 VAFSRDQHEKVYVQHRLLEQAELVWQWLQEGAYFYVCGDASRMAKDVHQALITVVEQQGGLNREQAEEYVSELRKAKRYQRDVY 614          
The following BLAST results are available for this feature:
BLAST of DY256624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NCPR_BOVIN3.230e-1444.19NADPH--cytochrome P450 reductase OS=Bos taurus GN=... [more]
NCPR_PIG9.398e-1443.02NADPH--cytochrome P450 reductase OS=Sus scrofa GN=... [more]
NCPR_HUMAN1.227e-1342.35NADPH--cytochrome P450 reductase OS=Homo sapiens G... [more]
NDOR1_DANRE4.664e-1341.18NADPH-dependent diflavin oxidoreductase 1 OS=Danio... [more]
NCPR_RABIT1.357e-1243.02NADPH--cytochrome P450 reductase OS=Oryctolagus cu... [more]
CYSJ_VIBPA1.772e-1240.48Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBVU2.315e-1239.29Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBF12.315e-1240.48Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_MOUSE3.023e-1241.86NADPH--cytochrome P450 reductase OS=Mus musculus G... [more]
CYSJ_VIBCH3.023e-1239.29Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1AF05ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256624 ID=DY256624; Name=DY256624; organism=Citrus clementina; type=EST; length=512bp
AAGGGTGGAGGCTTTTATGTTGCCTTCTCAAGGAAGCAACCACAAAAGGT
TTATGTTCAGCATAAGATGCTGGAACAGAGCCAGAGGATTTGGAATTTGC
TGCTTTCGAAAGCTTCAATATATGTTGCAGGCTCTGCAACCAAAATGCCC
TCAGATGTTTGGTCAACCTTTGAGGAAATTGTATCAAAAGAGGGGGAGGC
TTCAAGGGACTCCGCTGCAAACTGGCTTAAAGCATTACAAAGAGCCGGTA
GATACCATGTTGAAGCATGGTCCTGAACTGTACTTAATAGTCGGCAATTC
CTATTGCCATATTTGACCCTTCTGGTGGAAGATGGAAAGTAAAAGGGTAA
GTTTCTGAATAAGGTGCGTAAAATTGGATTTTTTTATATCTGAACTATGA
AATGAATACTCGGATTTGATTCATTCCCACTTCACAAATAGGTAGAGTAC
AGCTTGCAGAAAGCTTTGCTCCGGAAGCATTTAATGAAATGATTTATGCA
TAAATGTTCACA
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