DY256634

Overview
NameDY256634
Unique NameDY256634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1181
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15277 contig Ccv1_Contig15277:13..1193. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: MAF1_XENLA (Repressor of RNA polymerase III transcription MAF1 homolog OS=Xenopus laevis GN=maf1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.211e-27
Identity = 80/204 (39.22%), Postives = 106/204 (51.96%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHE----ILDYL------------GKSLDTDSSSPAEFLLSRSSRKALIYLVLTLYRMY-PDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MK LE +  + +N  L  +  G+  I G +E+YSCK  G DK +      E    +L+ L            GKS   D   P   L  + SRK L YL+ TL   + PDYDFSA +AH+F  E S N       + +  A  +       +SL   L+ A+DE + L EC+IYSYNPD D DPF E G +WSFN+FFYN+K K
Sbjct:    1 MKLLENSHFEAVNSQLC-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEALSPPQTGISPSRLGKSQGADEEGP---LSDKCSRKTLFYLIATLNESFRPDYDFSAARAHEFSREPSLNWVVNAVNSSLVSALGD-----DFTSLRPNLWDAVDEEINLSECDIYSYNPDLDCDPFGEDGNLWSFNYFFYNKKLK 195          
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: MAF1_DANRE (Repressor of RNA polymerase III transcription MAF1 homolog OS=Danio rerio GN=maf1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.887e-27
Identity = 79/201 (39.30%), Postives = 107/201 (53.23%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSLDTDSSS---PAEF----------LLSRSSRKALIYLVLTLYRMY-PDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MK LE +  + IN  L  +  G+  I G +E+YSCK  G DK++      E   ++ ++L    SS   P +           L  + SRK L YL+ TL   + PDYDFS  K H F  E S N    +F       S    E Y  S L   L++ALD+ + L EC+IYSYNPD DSDP+ E+G +WSFN+FFYN++ K
Sbjct:    1 MKLLENSSFEAINSLLT-IETGDCKIIGRIESYSCKMAGDDKQMFKQFCQEGQPHVLEALSPPQSSGISPNKLSHSLDDGEGPLSDKCSRKTLFYLIATLNESFRPDYDFSRTKGHDFSKEPSVNW---VFNAVNSSLSAAAGEAY--SHLQPQLWEALDKEISLAECDIYSYNPDLDSDPYGEEGNLWSFNYFFYNKRLK 195          
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: MAF1_BOVIN (Repressor of RNA polymerase III transcription MAF1 homolog OS=Bos taurus GN=MAF1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.401e-27
Identity = 76/202 (37.62%), Postives = 107/202 (52.97%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSLD---TDSSSPAEF-----------LLSRSSRKALIYLVLTLYRMY-PDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MK LE +  + IN  L  +  G+  I G +E+YSCK  G DK +      E   ++ ++L    T   SP+             L  + SRK L YL+ TL   + PDYDFS  ++H+F  E S +         +F A +E        +L   L+ A+DE + L EC+IYSYNPD DSDPF E G++WSFN+FFYN++ K
Sbjct:    1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEALSPPQTSGLSPSRLSKSQGGEDEGPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFSREPSLSWVVNAVNCSLFSAVRE-----DFKALKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLK 196          
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: MAF1_RAT (Repressor of RNA polymerase III transcription MAF1 homolog OS=Rattus norvegicus GN=Maf1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.097e-26
Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSLD---TDSSSPAEF-----------LLSRSSRKALIYLVLTLYRMY-PDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MK LE +  + IN  L  +  G+  I G +E+YSCK  G DK +      E   ++ ++L    T   SP+             L  + SRK L YL+ TL   + PDYDFS  ++H+F  E S           +F A +E        +L   L+ A+DE + L EC+IYSYNPD DSDPF E G++WSFN+FFYN++ K
Sbjct:    1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEALSPPQTSGLSPSRLSKSQGGEDESPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFSREPSLRWVVNAVNCSLFSAVRE-----DFKALKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLK 196          
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: MAF1_MOUSE (Repressor of RNA polymerase III transcription MAF1 homolog OS=Mus musculus GN=Maf1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.097e-26
Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSLD---TDSSSPAEF-----------LLSRSSRKALIYLVLTLYRMY-PDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MK LE +  + IN  L  +  G+  I G +E+YSCK  G DK +      E   ++ ++L    T   SP+             L  + SRK L YL+ TL   + PDYDFS  ++H+F  E S           +F A +E        +L   L+ A+DE + L EC+IYSYNPD DSDPF E G++WSFN+FFYN++ K
Sbjct:    1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEALSPPQTSGLSPSRLSKSQGGEDESPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFSREPSLRWVVNAVNCSLFSAVRE-----DFKALKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLK 196          
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: MAF1_HUMAN (Repressor of RNA polymerase III transcription MAF1 homolog OS=Homo sapiens GN=MAF1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.097e-26
Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSLD---TDSSSPAEF-----------LLSRSSRKALIYLVLTLYRMY-PDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MK LE +  + IN  L  +  G+  I G +E+YSCK  G DK +      E   ++ ++L    T   SP+             L  + SRK L YL+ TL   + PDYDFS  ++H+F  E S +         +F A +E         L   L+ A+DE + L EC+IYSYNPD DSDPF E G++WSFN+FFYN++ K
Sbjct:    1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEALSPPQTSGLSPSRLSKSQGGEEEGPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFSREPSLSWVVNAVNCSLFSAVRE-----DFKDLKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLK 196          
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: YEJC_SCHPO (Uncharacterized protein C31G5.12c OS=Schizosaccharomyces pombe GN=SPAC31G5.12c PE=2 SV=5)

HSP 1 Score: 100.908 bits (250), Expect = 1.535e-20
Identity = 60/197 (30.46%), Postives = 102/197 (51.78%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSLDTDSSSPAEFLLSR----------SSRKALIYLVLTLYRMYPDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MKFLE   LD +N+ L   +  +  I+G  E Y+ K T +DK+L  ++E+   + L  +L +  S    F L++          SSR+  +Y+V TL   YPD+DFS+++   F+ E S +       + +    +       G   +  +++ +D  + L +C +YSY PDSDSDP+ +   IW  ++FF+N+  K
Sbjct:    1 MKFLELADLDTVNNALS-FDADDCRIRGKCELYTTKSTNSDKKLFKAIENRCQEDLF-ALSSSKSPEYAFSLTQQSPFGPLDQSSSRRTFMYIVATLNASYPDHDFSSLQPTDFYKEPSLSRVVDSVNSTLNNIGR-------GRLSVNGIWEIIDRHINLSDCSVYSYTPDSDSDPYGDDALIWGMSYFFFNKNMK 188          
BLAST of DY256634 vs. ExPASy Swiss-Prot
Match: MAF1_DICDI (Repressor of RNA polymerase III transcription OS=Dictyostelium discoideum GN=maf1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.697e-19
Identity = 66/232 (28.45%), Postives = 107/232 (46.12%), Query Frame = 3
Query:  246 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDY---------------------------------------LGKSLDTDSS------SPAEFLLSRSSRKALIYLVLTLYRMYPDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKTK 806
            MK+++   L  +N +L+ +++G+  + G LEAYSCK  G+DK++  SL+ E+ +                                        L  S+++ S       SP   + + +SRK +IYL+  L   +PDYDF+  K  QF  E S N         +    K++   +        L+  L+  + L +CEIY Y P+ + DPF E G ++SFN+FFYN+  K
Sbjct:    1 MKYIDSLQLIGLNSYLNSIDVGDALLMGELEAYSCKMAGSDKKIYRSLDKELEELSNTNSGAMNITNSNNNTNNNNNNNSNSGSSNNNNNNNNTLSVSMNSPSPTSNISVSPFGPMSNSTSRKTMIYLIQLLNLSFPDYDFTDSKPEQFQKEPSLNLVINSINANLAGYIKDYYLEFEAK-----LWSTLESEISLQKCEIYLYKPE-NGDPFTENGVLFSFNYFFYNKSLK 226          
The following BLAST results are available for this feature:
BLAST of DY256634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MAF1_XENLA2.211e-2739.22Repressor of RNA polymerase III transcription MAF1... [more]
MAF1_DANRE2.887e-2739.30Repressor of RNA polymerase III transcription MAF1... [more]
MAF1_BOVIN8.401e-2737.62Repressor of RNA polymerase III transcription MAF1... [more]
MAF1_RAT1.097e-2637.62Repressor of RNA polymerase III transcription MAF1... [more]
MAF1_MOUSE1.097e-2637.62Repressor of RNA polymerase III transcription MAF1... [more]
MAF1_HUMAN1.097e-2637.62Repressor of RNA polymerase III transcription MAF1... [more]
YEJC_SCHPO1.535e-2030.46Uncharacterized protein C31G5.12c OS=Schizosacchar... [more]
MAF1_DICDI1.697e-1928.45Repressor of RNA polymerase III transcription OS=D... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1AG08ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256634 ID=DY256634; Name=DY256634; organism=Citrus clementina; type=EST; length=1181bp
GGAAAAAAATCAACTAACCTTTTTTCGTTATCCCCTATCTGACGGAACCT
GTCCGAATATTCTTTTTTAGGGTTCTTTCGGACCGCTTTCGATACCAAAT
TTTTGAAACGTTAAAATCTAGCAAATCGGCGAAATCAAACTTGCGAGAGA
CTTGCAATCTTTTTTCGTTTTAAGGATCTTCTGAAAGATTGTTGATCCCT
TTGTGCAATTTAAATTGAAATTTATTTTATCCATCATTGACCACCATGAA
GTTCTTAGAATACACTCCTCTAGACCGCATCAATGATTTCTTGGATCATT
TGAATCTTGGGGAACGTACTATCAAAGGATGCCTCGAAGCATATTCTTGC
AAACACACGGGAACTGATAAAAGACTGTCTATCAGCTTGGAACATGAGAT
TCTTGATTATCTTGGGAAATCATTGGATACTGACTCTTCCTCACCAGCTG
AATTCCTTTTGAGCAGATCCAGCCGAAAGGCATTGATCTACCTGGTGCTT
ACCCTCTATCGCATGTATCCGGACTATGACTTCAGTGCTGTGAAAGCACA
CCAGTTCTTCACAGAGGAAAGCTGGAACACTTTTAAGCAGATCTTTGAGA
CCTACATGTTTGAAGCTTCAAAGGAATGGAGTGAGACATACGGAGGCAGT
TCCCTTCTGGAAACATTATACAAGGCTTTGGATGAGGTTGTGAAGTTACC
TGAATGTGAAATTTACAGTTACAATCCAGATTCTGATTCAGACCCATTCC
TTGAGAAAGGAGCAATATGGTCTTTCAATTTCTTCTTCTACAACAGAAAA
ACTAAAGCGTGTTGTCAGTTTCCGGTTTTCTTGCTTAAGTAATTTGGGGG
GCGGAGGGATTTCTAGTTCATGGGTCAACTTACGAAAAAGAAGGAGAAAT
ATTTGATGACATGGACCTGTGAATAACAAACAACTTATGCTGGTAGTGGA
ATGTTTAAATGCCAAACCTCTTGACTTCTTCCTGGAATTACGGGACGGGA
CTTGGGGCTTTCCCTCCCGGGAGAACTAAAGGGGAAGGATAACCTTTCCC
GGTTTTCCGGGTCATATGCATTTCCAAAATTAGGAATGAAGCCGTGCCCC
TAAATTTGGGAAAAAAATCCCCTGGGGTTTTTTTGTTCCCCTCCCCCCTC
AACAAAAAAAAAAAAAGGTATTTGGTTTGGG
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