DY256713

Overview
NameDY256713
Unique NameDY256713
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1319
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY256713_ssr455 microsatellite DY256713_ssr455:455..472. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9536 contig Ccv1_Contig9536:4..1322. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256713 vs. ExPASy Swiss-Prot
Match: ZDH15_ARATH (Probable S-acyltransferase At4g00840 OS=Arabidopsis thaliana GN=At4g00840 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.150e-27
Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  189 INLFKLCSGLKVLGYFMILLXXXXXXXXXXXXXXXTCGPQLLRG--GVHSFFGFSIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCKNVMV 629
            +NLF+ CSGLKVLGYFMILL               T  P L+RG  G  S     II +FH LL+ML+WSY   VF DPGSVPE++R          G +LEAGTS+          +G   S+G+C +C+N KPPRCHHCSVC+  ++
Sbjct:    1 MNLFRFCSGLKVLGYFMILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALIIFVFHFLLIMLLWSYFTTVFTDPGSVPEHFR-----REMGGGDSLEAGTSTD---------QGAFGSLGYCTKCRNVKPPRCHHCSVCQRCVL 135          
BLAST of DY256713 vs. ExPASy Swiss-Prot
Match: ZDH14_ARATH (Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.001e-23
Identity = 63/145 (43.45%), Postives = 75/145 (51.72%), Query Frame = 3
Query:  192 NLFKLCSGLKVLGYFMILLXXXXXXXXXXXXXXXTCGPQLLRGGVHSFFGFSIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSS--QSLDNVG--PDARGPSRSVGFCDRCQNGKPPRCHHCSVC 614
            N+FK C+ L+ LG  MILL                 GP L +GG+ S    +I+ILFH LL ML+WSY  VVF DPG VP NWR            + E G S    SLD VG   D+   +  V FC +C   KP RCHHCSVC
Sbjct:   11 NVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAALTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWR---------PSTDEERGESDPLNSLDFVGLQSDSSSSNPRVRFCRKCNQLKPSRCHHCSVC 146          
BLAST of DY256713 vs. ExPASy Swiss-Prot
Match: ZDH18_ARATH (Probable S-acyltransferase At4g22750 OS=Arabidopsis thaliana GN=At4g22750 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.681e-21
Identity = 53/141 (37.59%), Postives = 68/141 (48.23%), Query Frame = 3
Query:  192 NLFKLCSGLKVLGYFMILLXXXXXXXXXXXXXXXTCGPQLLRGGVHSFFGFSIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVC 614
            N+FK C+ L+ LG  MIL+                 GP LL GGV S     ++  FH LL+ML+WSY  VV  DPG VP  WR           +++E    +Q+L          S  V +C +C   KPPR HHCSVC
Sbjct:    4 NVFKFCTALRALGSIMILIVIGIIGFTYYAVVVVNYGPALLIGGVDSLLSVLVLAFFHFLLIMLLWSYFSVVVTDPGGVPTGWRPE---------LDIEKSEGNQALIGEASVGDSSSHGVRYCRKCNQYKPPRSHHCSVC 135          
The following BLAST results are available for this feature:
BLAST of DY256713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ZDH15_ARATH1.150e-2746.31Probable S-acyltransferase At4g00840 OS=Arabidopsi... [more]
ZDH14_ARATH5.001e-2343.45Probable S-acyltransferase At3g60800 OS=Arabidopsi... [more]
ZDH18_ARATH4.681e-2137.59Probable S-acyltransferase At4g22750 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1CG10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256713 ID=DY256713; Name=DY256713; organism=Citrus clementina; type=EST; length=1319bp
GGCTCTGTTCCCAGTACAAACTAATCTCGAACTGTGCCCTAATTTCTCTT
CTGAATTAAAGTTACCGGGACACATCAACTCCAGGCAAGAACAGGTAAAA
CCTGGCTTCGGATATCTGGAAACGCCTGTTCCCACCGCGATCCAGAAGAT
ACCAACCAATCATCCCCGAAATCAACTTGGGCATGGACATAAACCTTTTC
AAGCTCTGTTCCGGCCTCAAAGTGCTGGGCTACTTCATGATCCTGCTAGT
GGCCGCAATTATCGCTGTGTCGTACTACGCCGTCGTTGTAATTACCTGTG
GCCCACAGTTGCTTCGCGGCGGAGTCCACTCTTTTTTTGGGTTCTCAATA
ATTATTCTATTCCATATTCTGCTTGTAATGTTGGTATGGAGCTATGTTAT
GGTAGTGTTTTGGGACCCTGGTTCTGTGCCTGAAAATTGGAGGTCAGTTT
CAGTATCATCATCATCATCATCGGGGGTGAATTTAGAGGCTGGTACTTCT
TCTCAATCATTAGATAACGTGGGACCGGATGCACGGGGTCCTTCACGGTC
GGTAGGCTTCTGTGATCGATGCCAAAATGGGAAGCCTCCCCGTTGCCATC
ATTGTTCTGTTTGTAAGAACGTTATGGTACTTTTGTCTTTGGAAGTTAAT
TAATATGCATCTGTGGCAGCAAGTTAGTCAACTGAATCTCTCTTACCTTC
TAACACTATCGATTTAGTCATAAAATATCAATAATATGAATTTATATATG
CGTATGTTTGTGTATTCACTATAAACCCTGTCTAAATGAATCATTTTCAA
ATTTCTCCCCATTTTTAGACACCATTAACATTGTTGGAAAATTGCTGGCA
TACTACTGGCATACACGGGAAGTTATTGCATTCTGGAAATTGATTTTACA
AAATGAGGTAGTTCTATGTTTTTGTTATTTCCTGCCGGTCAAAAATGTGT
TCTTAAGATGGATCCCACTGGGGTTTGGGGGGGGAATTGGGTGGAACGCG
CAACTACAAGTCTTTTTCCTCTTTTCTTTATGTTATACATTTCGGGGAAA
ACAAATGGGAAAACCCTGGGTGGTGTTGGCCTAGTTTTTATCAGGTTTTT
TTGGGAAAAACCAAAAAAACCCTTTTTTCCCCTCCCCCGGCCCAAATCTA
ACCTATTCGGTTTTTTCTCAAGCCTTTTTGGTTAATAAAAAATTGGGGGC
TTTTTGTGCTTTTTTAGAACTCTCTTCTCTTGTTTTTTTTTCTTTGGGTG
TCCAGGGCCCACATTTTTCCCCGCCCCCCGTTTGGGGCAATTCCACAAGC
CCCACCCACCCCCCCCCAG
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