DY256718

Overview
NameDY256718
Unique NameDY256718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length445
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10425 contig Ccv1_Contig10425:253..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256718 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.194e-15
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   16 IPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GPEVDMTASYGLSLSKTVPLVAMCSPRQDMIGML 225
            +PFG GRR CPGA +  R ++ ALGSLIQCFEWE + G E+DM+ S GL + K  PL AMC PR  M  +L
Sbjct:  429 MPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSESTGLGMRKMDPLRAMCRPRPIMSKLL 499          
BLAST of DY256718 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.840e-14
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 1
Query:   16 IPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIG-PEVDMTASYGLSLSKTVPLVAMCSPR 204
            + FG+GRRACPG+ +A R +  ALGSLIQCFEWE++G  EVDM    G ++ K +PL A+C  R
Sbjct:  431 LAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAICKAR 494          
BLAST of DY256718 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 1
Query:   16 IPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GPEVDMTASYGLSLSKTVPLVAMCSPR 204
            I FGMGRRACPG  +AIR IS  L  LIQCF+W+ I G ++D+    G +L+K VPL AMC  R
Sbjct:  427 IAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGDKIDLAERDGFTLTKLVPLKAMCKSR 490          
The following BLAST results are available for this feature:
BLAST of DY256718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
C81F1_ARATH1.194e-1556.34Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C81D1_ARATH3.840e-1454.69Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C81E1_GLYEC2.489e-1356.25Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1CH09ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256718 ID=DY256718; Name=DY256718; organism=Citrus clementina; type=EST; length=445bp
AGAGGGATTCAACATATTCCATTTGGCATGGGGAGGAGAGCTTGCCCAGG
TGCAGCCATGGCTATCCGTACAATTTCTTTTGCTTTGGGTTCGCTCATAC
AGTGCTTCGAGTGGGAAAAGATAGGGCCGGAGGTGGACATGACTGCAAGT
TATGGACTATCTCTATCTAAGACCGTGCCTTTGGTGGCTATGTGCAGTCC
GCGGCAAGATATGATTGGAATGCTGAACAGATCCAGTTAGGGTAAACTTG
CCGCTGGAAATTCTCGGGGTTTGCAGGGGACCTTGCAGGTGACTTTCAAT
AAAGGTTGTAAAATTTACTGGAATTTGTAGAGCAGTACTCTAGAGACTGT
AGATCACTTCATGCCATGGCATTGCGTGACCAAATTTTAGATTTGATAAT
CCTGTTTTGTGGTTTTGCGGTAGTTTCTTAATATCGGTTTGATTC
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