DY256945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256945 vs. ExPASy Swiss-Prot
Match: PHF5_ARATH (Uncharacterized protein At1g07170/At2g30000 OS=Arabidopsis thaliana GN=At1g07170 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.273e-62 Identity = 106/110 (96.36%), Postives = 109/110 (99.09%), Query Frame = 1 Query: 112 MAKHHPDLIMCRKQPGIAIGRLCEKCEGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYKRNKYGFKKR 441 MAKHHPDLIMCRKQPGIAIGRLCEKC+GKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY+R KYGFKKR Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
BLAST of DY256945 vs. ExPASy Swiss-Prot
Match: PHF5A_RAT (PHD finger-like domain-containing protein 5A OS=Rattus norvegicus GN=Phf5a PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.456e-58 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 1 Query: 112 MAKHHPDLIMCRKQPGIAIGRLCEKCEGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYKRNKYGFKKR 441 MAKHHPDLI CRKQ G+AIGRLCEKC+GKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFY+R KYGFKKR Sbjct: 1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of DY256945 vs. ExPASy Swiss-Prot
Match: PHF5A_MOUSE (PHD finger-like domain-containing protein 5A OS=Mus musculus GN=Phf5a PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.456e-58 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 1 Query: 112 MAKHHPDLIMCRKQPGIAIGRLCEKCEGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYKRNKYGFKKR 441 MAKHHPDLI CRKQ G+AIGRLCEKC+GKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFY+R KYGFKKR Sbjct: 1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of DY256945 vs. ExPASy Swiss-Prot
Match: PHF5A_HUMAN (PHD finger-like domain-containing protein 5A OS=Homo sapiens GN=PHF5A PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.456e-58 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 1 Query: 112 MAKHHPDLIMCRKQPGIAIGRLCEKCEGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYKRNKYGFKKR 441 MAKHHPDLI CRKQ G+AIGRLCEKC+GKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFY+R KYGFKKR Sbjct: 1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of DY256945 vs. ExPASy Swiss-Prot
Match: PHF5_DROME (Uncharacterized protein CG9548 OS=Drosophila melanogaster GN=CG9548 PE=3 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.780e-56 Identity = 95/109 (87.16%), Postives = 103/109 (94.50%), Query Frame = 1 Query: 112 MAKHHPDLIMCRKQPGIAIGRLCEKCEGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYKRNKYGFKK 438 MAKHHPDLI CRKQPG+AIGRLCEK +GKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCK CT QEKDRDGCPKIVNLGS+KTDLFY+R KYGFK+ Sbjct: 1 MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKSCTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQ 109
BLAST of DY256945 vs. ExPASy Swiss-Prot
Match: INI1_SCHPO (Pre-mRNA-splicing factor ini1 OS=Schizosaccharomyces pombe GN=ini1 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.323e-43 Identity = 69/105 (65.71%), Postives = 90/105 (85.71%), Query Frame = 1 Query: 112 MAKHHPDLIMCRKQPGIAIGRLCEKCEGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYKRNKY 426 M+KHHPDL++CR+QPGI +G+LCE+C+ KC ICDS+VRP TLVR+CDEC +GS Q RC+ICG G+SD YYC ECT+ E DRDGCP+++NLGS++TD FY+R K+ Sbjct: 1 MSKHHPDLVLCRRQPGITVGKLCERCDEKCPICDSHVRPTTLVRICDECAFGSSQDRCIICGAPGVSDCYYCSECTRMEYDRDGCPRVINLGSSRTDWFYERKKF 105
BLAST of DY256945 vs. ExPASy Swiss-Prot
Match: RDS3_YEAST (Pre-mRNA-splicing factor RDS3 OS=Saccharomyces cerevisiae GN=RDS3 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.416e-31 Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 112 MAKHHPDLIMCRKQPGIAIGRLCEKCEGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICG-GVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYKRNK 423 M++H DLIMC KQPG+ G LCEKC+GKC ICDSYVRP VRVC+ C++G C+IC VG++DA+YC EC + KD+DGCP+I+NLGS + D +++ K Sbjct: 1 MSRHQFDLIMCLKQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWECCRLGKDKDGCPRILNLGSNRLDRHFEKKK 105 The following BLAST results are available for this feature:
BLAST of DY256945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256945 ID=DY256945; Name=DY256945; organism=Citrus clementina; type=EST; length=832bpback to top |