DY258252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 3.239e-73 Identity = 125/161 (77.64%), Postives = 137/161 (85.09%), Query Frame = 3 Query: 198 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 680 M+ SS+ +RKALSKIACNRLQKEL+EWQVNPP+GFKH+ TDNLQ+WVIEV GAPGTLYANETY LQVEFP+ YPMEAPQVIF+ P+PLHPH+YSNGHICLDILYDSWSPAMTV KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV Sbjct: 1 MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 3.239e-73 Identity = 125/161 (77.64%), Postives = 135/161 (83.85%), Query Frame = 3 Query: 198 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 680 MS S +RK LSKIA NRLQKEL EWQ+NPP+GFKHK TDNLQRW+IEV GAPGTLYAN+TYQLQV+FPE YPME+PQVIFLHP+PLHPH+YSNGHICLDILYDSWSPAMTV T KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV Sbjct: 1 MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 273.092 bits (697), Expect = 2.100e-72 Identity = 122/161 (75.78%), Postives = 135/161 (83.85%), Query Frame = 3 Query: 198 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 680 M+ SS +RKALSKIACNRLQKEL+EWQ+NPP+GF+HK TDNLQ+W I+V GAPGTLYANETYQLQVEFPE YPMEAPQV+F+ P+P HPH+YSNGHICLDILYDSWSPAMTV KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV Sbjct: 1 MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.408e-68 Identity = 116/161 (72.05%), Postives = 133/161 (82.61%), Query Frame = 3 Query: 198 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 680 M+ SS +TRK L+KIA NRLQKE EWQ NPPSGFKH+ +DNLQRW+IEV+G PGTLYANETYQLQVEFPE YPMEAPQVIF HP+PLHPH+YSNGHICLD+LYDSWSPAM + +VKQ+P+DND Y+KNC++GRSPKETRW FHDDKV Sbjct: 1 MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.572e-35 Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = 3 Query: 252 RLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 680 RLQKEL + + NPP DNL +WVI V+G G++Y E ++LQ +F YP+++P+VIF+ P+HPH+YSNGHICL ILYD+WSPA+TV T K RP D+ +YV N +SPKE RW FHDD V Sbjct: 8 RLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSGCTEKIRPTDDSKYVSRVLN-KSPKEVRWMFHDDTV 149
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.626e-32 Identity = 65/145 (44.83%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 252 RLQKELAEWQVNPPSGF---KHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPS-PLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDD 674 RLQKEL Q +PP G + +++ +W++++ GAPGTLY E +QL +F RYP ++PQV+F + P+HPHVYSNGHICL IL + WSPA++V K+RP DN YV+ C ++PK+T+WW+HDD Sbjct: 7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTC--NKNPKKTKWWYHDD 149
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.124e-32 Identity = 65/145 (44.83%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 252 RLQKELAEWQVNPPSGF---KHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPS-PLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDD 674 RLQKEL Q +PP G + +++ +W++++ GAPGTLY E +QL +F RYP ++PQV+F + P+HPHVYSNGHICL IL + WSPA++V K+RP DN YV+ C ++PK+T+WW+HDD Sbjct: 7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTC--NKNPKKTKWWYHDD 149
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 1.377e-31 Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 252 RLQKELAEWQVNPPSGF---KHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPS-PLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDD 674 RLQKEL Q +PP+G + + + W I++ GA GT+Y E +QL +F RYP E+PQV+F + P+HPHVYSNGHICL IL + WSPA++V K+RP DN YVK C ++PK+T+WW+HDD Sbjct: 7 RLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVKTC--NKNPKKTKWWYHDD 149
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.529e-14 Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 183 SRETSMSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFK-HKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWS 521 S S G + T A + RLQ+EL ++ G +DNL +W+ ++GA GT+Y + Y+L +EFP YP AP V F+ P HP+V S+G+ICLDIL D WS Sbjct: 12 SSVASRKGQESGTSAARGSVG-KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPC-FHPNVDSHGNICLDILKDKWS 123
BLAST of DY258252 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.811e-14 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 252 RLQKELAEWQVNPPSGFK-HKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWS 521 RLQ+EL ++ G +DNL +WV ++GA GT+Y + Y+L +EFP YP AP V FL P HP+V + G+ICLDIL D WS Sbjct: 34 RLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC-YHPNVDTQGNICLDILKDKWS 123 The following BLAST results are available for this feature:
BLAST of DY258252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258252 ID=DY258252; Name=DY258252; organism=Citrus clementina; type=EST; length=1124bpback to top |