DY258334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 4.626e-45 Identity = 87/174 (50.00%), Postives = 115/174 (66.09%), Query Frame = 1 Query: 82 PALCSSQNTLTSSTATYYGSPDGLGTPTGACGFGGYGRTVNDANEAGVS-RL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDW 600 P LC S + +S ATYYGSPD P G CG+G +GR +N+ +GVS RL NNGTGCG CY RC +P GV V+ TD GEGD TDFILSP+ Y MA QLYS+GV++VE++ +PCR G N+++K+HE P YLA+ +LYV G D+L ++W++D K+W Sbjct: 19 PLLCLSDD-FVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEW 191
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.266e-26 Identity = 73/227 (32.16%), Postives = 110/227 (48.46%), Query Frame = 1 Query: 112 TSSTATYYGSPDGLGTPTGACGFGGYGRTVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDDTDFILSPRIYEIMA-ITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRK--DWVPDNKGFPCSI*HP*STTTSN*FEGSSERNRGGSFVLWQNNAIPKKCKAGSGYEAPIHLEL 783 T S A YY + D GT GAC +G +G T+N+ + + + L +G GCG CY RC P GV++++TD G D TDFILS + MA TD L + GV+ +E+ V C +N++FK+ E +P YL + Y G D++ + + G + P S S SS RGG L N +P+ AG+ Y++ + ++L Sbjct: 29 TVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASASLYRDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATYDSGVQVQL 255
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.269e-18 Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 1 Query: 109 LTSSTATYYGSPDGLGTPTGACGFGGYGRTVNDAN-EAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDDTDFILSPRIYEIMA--ITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDW 600 L S A+Y+ S L + GAC +G + + A + + +G GCG C+ RC P++ + G V+VTD + TD +LS R + MA + + L G++DVE++ VPC +N+ +V E + P YLA+ +LY G+ +V+ DI W Sbjct: 25 LHRSKASYFSSASALSS--GACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQW 189
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.657e-18 Identity = 64/238 (26.89%), Postives = 106/238 (44.54%), Query Frame = 1 Query: 109 LTSSTATYYGSPDGLGTPTGACGFGGYGRTVNDAN-EAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDDTDFILSPRIYEIMA--ITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDI--------W----RKDRKDWVPDNKGFPCSI*HP*STTTSN*FEGSSERNRGGSFVLWQNNAIPKKCKAGSGYEAPIHL 777 L S A Y+ S L + GAC +G + + A + + +G GCG C+ RC P++ G V++TD + + TD +LS R + MA I + L G++D+E++ VPC +N+ +V E + P YL + +LY G+ +V+ DI W R WV D P T ++G ++W + +P +AG Y+A + + Sbjct: 25 LHRSKAAYFSSASALSS--GACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDK--VPTGAIQFRFVVTGG-YDGK---------MIWSQSVLPSNWEAGKIYDAGVQI 248
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.074e-17 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 1 Query: 109 LTSSTATYYGSPDGLGTPTGACGFGGYGRTVNDAN-EAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDDTDFILSPRIYEIMA--ITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDW 600 L SS A Y+ S L + GAC +G + A + + +G+GCG C+ RC P + + G +V+VTD + + TD +LS R + MA + L G++D+E+ VPC + + +V E + P YLA+ +LY G+ +V+ I + W Sbjct: 26 LHSSKAAYFSSASALSS--GACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHW 190
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLA3_ORYSJ (Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.455e-16 Identity = 53/179 (29.61%), Postives = 78/179 (43.58%), Query Frame = 1 Query: 82 PALCSSQNTLTSSTATYYGSPDGLGTPTGACGFGGYGRTVNDAN------EAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDW 600 P + + + + A Y SP P G G GYG + AG R G GCG C+ RC EV N GV V++TD+ + TDF+L + +A +L + VE+ +PC K +N+ V E + P L + LY G+ D+L D+ + DW Sbjct: 24 PRASACERCVRNGKAAY--SPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDALSVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDW 200
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 4.512e-16 Identity = 55/166 (33.13%), Postives = 77/166 (46.39%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPT--GACGFGGYGR-TVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTD--YGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWVP 606 AT+YG+P G G GACGF + + G + +G GCG+CY RC +V++TD Y F LS + MA + +QL G+ID++F+ VPC G V F V E P Y AV + Y G DV+ D+ + + W P Sbjct: 47 ATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPACSGNPETVIITDMNYYPVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSN-PVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 211
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.512e-16 Identity = 51/163 (31.29%), Postives = 74/163 (45.40%), Query Frame = 1 Query: 118 STATYYGSPDGLGTPTGACGFGGYGRTVNDAN--EAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDW 600 S A YY S L G+CG+G T N A L G GCG CY RC ++ N G V+VTD + T +LS + MA L +DVE++ VPC + +++ +V E R P L ++ LY G+ D++ D+ + W Sbjct: 43 SRAAYYTS--SLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSW 203
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 7.697e-16 Identity = 72/241 (29.88%), Postives = 106/241 (43.98%), Query Frame = 1 Query: 112 TSSTATYYGSPDGLGTPTGACGFGGY--GRTVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDI--------WRKDRKDW-----VPDNKGFPCSI*HP*STTTSN*FEGSSERNRGGSFVLWQNNAIPKKCKAGSGYEAPIH 774 +S AT+YG P G G+ GACG+ R + AG L NG GCG+CY +C V+V++TD G + F +S + MA ++L S GV+ ++++ VPCR NV FKV P YLA+ + Y +G D+ I W+ ++ W + N G P S P S ++ G VL NN IP +AG Y + ++ Sbjct: 46 SSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGNRACSGRPVTVVITDSCPGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRF-AMNVAFKVDAGSN-PYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLS--PPFSIRLTS----------GSGKVLVANNVIPSGWQAGLTYRSTVN 272
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.820e-15 Identity = 48/148 (32.43%), Postives = 72/148 (48.65%), Query Frame = 1 Query: 166 GACGFGGYGRTVNDANEAGVS-RL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGDD-TDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCR-IKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDW 600 G+CG+G + N + A S L G GCG C+ RC ++ G V+VTD + TD +LS Y MA QL + +DVE++ VPC G+N+ +V E R P L++ LY G+ D++ D+ +W Sbjct: 52 GSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNW 199 The following BLAST results are available for this feature:
BLAST of DY258334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258334 ID=DY258334; Name=DY258334; organism=Citrus clementina; type=EST; length=1077bpback to top |