DY258374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: PGTB1_RAT (Geranylgeranyl transferase type-1 subunit beta OS=Rattus norvegicus GN=Pggt1b PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 3.875e-46 Identity = 103/279 (36.92%), Postives = 153/279 (54.84%), Query Frame = 1 Query: 61 SSSSDGEEQAASDGSSSQFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPSNKADLTNGEFYGFHGSP--SSQLHPDDNGVLMH--NGSNLASTYCALAILKAVGYNFANIDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 +++ D + +G F R +HV F + LP Y E +R+T+A FA+SGL +L +LD V+KD + +W+ SL+ P+ D +N + GF GS +P N H + ++A TY L+ L +G + + +D ++ L +R LQ DGSF + G+E D+RFVYCA+ IC++L +WSGMD ++A +YI SYD G G ESHGG T+C +ASL LMG +E+ K + WC+ RQ G+ GR KP D Sbjct: 2 AATEDDRLAGSGEGERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTE--DRSNLDRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKEL-------NRIKRWCIMRQ--QNGYHGRPNKPVD 269
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: PGTB1_MOUSE (Geranylgeranyl transferase type-1 subunit beta OS=Mus musculus GN=Pggt1b PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 8.633e-46 Identity = 103/279 (36.92%), Postives = 151/279 (54.12%), Query Frame = 1 Query: 61 SSSSDGEEQAASDGSSSQFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPSNKADLTNGEFYGFHGSP--SSQLHPDDNGVLMH--NGSNLASTYCALAILKAVGYNFANIDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 +++ D + +G F R +HV F + LP Y E +R+T+A FA+SGL +L +LD V+KD + +W+ SL+ P+ D +N GF GS +P N H + ++A TY L+ L +G + +D ++ L +R LQ DGSF + G+E D+RFVYCA+ IC++L +WSGMD ++A +YI SYD G G ESHGG T+C +ASL LMG +E+ K + WC+ RQ G+ GR KP D Sbjct: 2 ATTEDDRLAGSGEGERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTE--DRSNLSRCGFRGSSYLGIPFNPSKNPGAAHPYDSGHIAMTYTGLSCLIILGDDLGRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKEL-------NRIKRWCIMRQ--QNGYHGRPNKPVD 269
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: PGTB1_BOVIN (Geranylgeranyl transferase type-1 subunit beta OS=Bos taurus GN=PGGT1B PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.280e-45 Identity = 102/279 (36.56%), Postives = 151/279 (54.12%), Query Frame = 1 Query: 61 SSSSDGEEQAASDGSSSQFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPSNKADLTNGEFYGFHGSP--SSQLHPDDNGVLMH--NGSNLASTYCALAILKAVGYNFANIDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 +++ D + +G F R +HV F + LP Y E +R+T+A FA+SGL +L +LD V+KD + +W+ SL+ P+ D +N GF GS +P N H + ++A TY L+ L +G + + ++ ++ L +R LQ DGSF + G+E D+RFVYCA+ IC++L +WSGMD ++A YI SYD G G ESHGG T+C +ASL LMG +E+ K + WC+ RQ G+ GR KP D Sbjct: 2 AATEDERPTGSGEGERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTE--DRSNLNRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKEL-------NRIKRWCIMRQ--QNGYHGRPNKPVD 269
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: PGTB1_HUMAN (Geranylgeranyl transferase type-1 subunit beta OS=Homo sapiens GN=PGGT1B PE=1 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 4.284e-45 Identity = 101/284 (35.56%), Postives = 151/284 (53.17%), Query Frame = 1 Query: 61 SSSSDGEEQAASDGSSSQFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPS------NKADLTNGEFYGFHGSPSSQ---LHPDDNGVLMHNGSNLASTYCALAILKAVGYNFANIDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 +++ D + +G F R +HV F + LP Y E +R+T+A FA+SGL +L +LD V+KD + +W+ SL+ P+ N+ + G +PS HP D+G ++A TY L+ L +G + + ++ ++ L +R LQ DGSF + G+E D+RFVYCA+ IC++L +WSGMD ++A YI SYD G G ESHGG T+C +ASL LMG +E+ K + WC+ RQ G+ GR KP D Sbjct: 2 AATEDERLAGSGEGERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSG-------HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKEL-------NRIKRWCIMRQ--QNGYHGRPNKPVD 269
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: PGTB1_DICDI (Geranylgeranyl transferase type-1 subunit beta OS=Dictyostelium discoideum GN=pggt1b PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 9.266e-32 Identity = 89/270 (32.96%), Postives = 135/270 (50.00%), Query Frame = 1 Query: 109 SQFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDKDA--VSDWVLSLKAHPSNKADLTNGEFYGFHGSP--------SSQLHPDDNGVLMHNGSNLASTYCALAILKAVGYNFANIDSKSILTSMRNLQQH-DGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 S N ++ F +LP Y N ++L F +SGL LL D ++K+ + +WV S + PS N E GF G +H +NG L ++ + +TYCAL IL+ +G +F+ ++ K+I+ S+R Q+ DG+ + DLR ++ A AI F+L+DWS +++E A YI +C SY+ FG TP E+HGG TYCA+ASL L+G + W +++Q GF GR K D Sbjct: 3 SCINEEKLAKFFQRSLNALPAPYTSGLPNHLSLIFFVVSGLDLLNKTDILEKEKQDIINWVYSRQILPSKDNPEINLENCGFRGYNFLGQEFCCDKSVHTSENGPLEYDLPSTPNTYCALLILRILGDDFSGVNKKAIIDSLRKRQRESDGAISGSPNVGDYDLRHLFSACAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASLSLLG---------RLDVLEPFKEQLTFWLVKKQIT--GFCGRTNKDPD 261
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: PGTB2_DICDI (Probable geranylgeranyl transferase type-2 subunit beta OS=Dictyostelium discoideum GN=rabggtb PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 3.303e-21 Identity = 79/238 (33.19%), Postives = 117/238 (49.16%), Query Frame = 1 Query: 175 YQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPSNKADLTNGEFYGFHGSPSSQLHPDDNGVLMHNGSNLASTYCALAILKAVGYNFAN-IDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 Y E R+ ++ +S L LL +LD++DK+ V W+LS + +NG GF G+ S H L ST A+ IL + Y+ + ID S++ + LQ+ DGSF+ +G E D RF Y A LL+ ++ E+A YIL+CQ++DGGFG PG+ESH G + V +L ++ I + K W +RQ +GG +GR K SD Sbjct: 43 YWVTEHIRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQK--------SNG---GFGGNTSHDDH-------------LLSTLSAVQIL--IQYDALDKIDINSVVDYVVKLQREDGSFVGDQWG-EVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALSILNEINKIDIDK-----------LGWWLSERQLPNGGLNGRPEKSSD 242
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: PGTB1_SCHPO (Geranylgeranyl transferase type-1 subunit beta OS=Schizosaccharomyces pombe GN=cwg2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.813e-19 Identity = 75/266 (28.20%), Postives = 115/266 (43.23%), Query Frame = 1 Query: 112 QFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPSNKADLTNGEFYGFHGSPSSQLHPDDNGVLMHNGSNLASTYCALAILKAVGYNFANIDSKSILTSMRNLQQHDGSFMPIHFGA--EKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLM------GFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 + R +H+AF P Y+ + R LA F + GL LL AL+ +D D W+ + + K + G Y + + + P + LA T ++ L +G N + ID I + + G F I + ++D+R +Y A I LL D+S D + YI +CQ Y+GGF L P E+H G T+CA+AS L+ + + S N+ W RQ + GG +GR K D Sbjct: 2 ELTRAKHIAFFKRHLILFPTPYEEHDCERTVLAFFCLLGLDLLNALNTIDDDDKKSWIEWIYKNYVTKE--SKGIKYSGFQAYRTGIQP----ISFEQEPQLAGTVFSICCLLFLGDNLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDMRQLYMATTIASLL-DFSLSDPLCSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSLILKMIPNSSLNTSNQSYNLMDCVPKVERLIRWLASRQLSSGGLNGRTNKDVD 260
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: FNTB_DICDI (Protein farnesyltransferase subunit beta OS=Dictyostelium discoideum GN=fntB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.004e-18 Identity = 72/275 (26.18%), Postives = 129/275 (46.91%), Query Frame = 1 Query: 82 EQAASDGSSSQFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDK-DAVSDWVLSLKAHPSNKADLTNGEFY----GFHGSPSSQLHPDDNGVLMHNGSNLASTYCALAILKAVGY--NFANIDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 E+ S + + +++ + FLM E +P +Q + +++ ++ + ++G+ +L +LD + + LS+ + N + N E GF G S H + ST+ A++ L +G ++ ID +++ + ++ +G+F G E D R YCA A+ +L + ++L+CQ+Y+GGFG P +E+HGG T+C+VA+L ++ N L K W RQ+ DGGF GR K D Sbjct: 45 EKLNSTENGNIIEKKKILNFLMNGIEKIPMSHQGLDSSKVWISFWILNGMDMLDSLDSYPNISSRASKYLSILQNDDNNGNNNNRENNQNGGGFGGGNSHTSH-------------VVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAFTS-EDGGEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSIL-----NSLHK------IDMNSLHRWITYRQSNDGGFEGRTNKLVD 294
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: GGTB2_CAEEL (Probable geranylgeranyl transferase type-2 subunit beta OS=Caenorhabditis elegans GN=ggtb-1 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 3.780e-17 Identity = 67/239 (28.03%), Postives = 107/239 (44.77%), Query Frame = 1 Query: 169 HHYQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPSNKADLTNGEFYGFHGSPSSQLHPDDNGVLMHNGSNLASTYCALAILKAVGYNFANIDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 +HY E R++ ++ ++ + L L+R+ + + ++VL + T+G G+ +P H L+H T CA+ L + + D+ +I ++ LQQ DGSF E D RF C+ A C LL S ++ + A +++ C + DGGFG PGSESH G YC V +L + G +++ W RQ GG +GR K D Sbjct: 43 YHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRN--------TDG---GYGPAPGHDSH------LLH-------TLCAVQTL-IIFNSIEKADADTISEYVKGLQQEDGSFCG-DLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDE-----------IDRDRTAEWLAFRQCDSGGLNGRPEKLPD 244
BLAST of DY258374 vs. ExPASy Swiss-Prot
Match: FNTB_ARATH (Protein farnesyltransferase subunit beta OS=Arabidopsis thaliana GN=FTB PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 5.458e-16 Identity = 69/260 (26.54%), Postives = 114/260 (43.85%), Query Frame = 1 Query: 112 QFNRQQHVAFLMMMYESLPHHYQYQEINRITLAHFAISGLCLLGALDRVDKDAVSDWVLSLKAHPSNKADLTNGEFYGFHGSPSSQLHPDDNGVLMHNGSNLASTYCALAILKAVGYNFA--NIDSKSILTSMRNLQQHDGSFMPIHFGAEKDLRFVYCAAAICFLLEDWSGMDRERAKAYILNCQSYDGGFGLTPGSESHGGGTYCAVASLRLMGFIEDNVLSKNMXXXXXXXXXXXXWCLQRQAADGGFSGRAYKPSD 885 + R + + +LM L + + NR L ++ + + LLG + V D L+++ + G G+ G P H LA+TY A+ L +G + A +I+ + + +R ++ G F +H E D+R Y A ++ +L + YIL+CQ+Y+GG G PGSE+HGG TYC +A++ L+ ++ L M W + RQ + GF GR K D Sbjct: 2 EIQRDKQLDYLMKGLRQLGPQFSSLDANRPWLCYWILHSIALLG-------ETVDD---ELESNAIDFLGRCQGSEGGYGGGPGQLPH-------------LATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGGFR-MHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLM-----------NWAVHRQGVEMGFQGRTNKLVD 226 The following BLAST results are available for this feature:
BLAST of DY258374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258374 ID=DY258374; Name=DY258374; organism=Citrus clementina; type=EST; length=1243bpback to top |