DY258685

Overview
NameDY258685
Unique NameDY258685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1191
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14207 contig Ccv1_Contig14207:554..1743. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.435e-58
Identity = 118/162 (72.84%), Postives = 131/162 (80.86%), Query Frame = 3
Query:    3 GFACLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQNGVKMGLQ 488
            GFA LVGMT +IALLSE+VV TIEDAS+SWG+SVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQI++FVVPL VI++WI+GI MDLNFN+LET S            QDGTSHYMKG VLLLCY +I ACFFV   P     N + +GLQ
Sbjct:  290 GFAWLVGMTIVIALLSEYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSHYMKGLVLLLCYVIIAACFFVDQIP---QPNDLDVGLQ 448          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 219.935 bits (559), Expect = 2.291e-56
Identity = 112/168 (66.67%), Postives = 128/168 (76.19%), Query Frame = 3
Query:    3 GFACLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQNGVKMGLQSSTGTV 506
            GFA LVGMT +IALLSE+VV TIE+AS+ W +SVSFISIILLPIVGNAAEHAGA+IFAFKNKLDISLGVALGSATQI +FVVPL +I++WI+GI MDLNF  LETG             QDG+SHYMKG VLLLCYF+I  CFFV   P    QN + +G Q+    V
Sbjct:  288 GFAWLVGMTLVIALLSEYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKLDISLGVALGSATQIGLFVVPLTIIVAWILGINMDLNFGPLETGCLAVSIIITAFTLQDGSSHYMKGLVLLLCYFIIAICFFVDKLP--QKQNAIHLGHQAMNNVV 453          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 8.150e-54
Identity = 107/165 (64.85%), Postives = 131/165 (79.39%), Query Frame = 3
Query:   24 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRPL-DSDQNGVKMGLQSSTGTVLRA 515
            MTA+I++LSE+VVGTIE  S SWG+SVSFISIILLPIVGNAAEHAGAIIFA KNKLDI+LGVALGSATQI++FVVPL V+++WIMG+ MDL+F LLETGS            QDGTSHY+KG +LLLCY VIGACFFV+ +P   ++ NG  + + + + +V  A
Sbjct:  287 MTAVISVLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQPAGHANSNGALLDVPTGSMSVQAA 451          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.699e-51
Identity = 99/145 (68.28%), Postives = 119/145 (82.07%), Query Frame = 3
Query:   15 LVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRP 449
            L+ MT ++ALLS+++V TI+DA++SWG+SV FI IILLPIVGNAAEHAGA+IFAF+NKLDI+LG+ALGSATQIA+FVVP+ V+++W MGI MDLNFNLLET              QDGTS+YMKG VLLLCY VI ACFFVSN P
Sbjct:  296 LIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSP 440          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.331e-47
Identity = 96/150 (64.00%), Postives = 114/150 (76.00%), Query Frame = 3
Query:   24 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQNGV 473
            MT + ALLS +VV TIE AS SW +SVSFISIILLPIVGNAAEHAGA+IFA KNK+DI+LGV+LGSATQI++FVVP+ VI++W MGI MDL+FNLLETGS            Q+G SHY+KG +L+LCY VI  CFFV  R      +GV
Sbjct:  297 MTLLTALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFVIRRRSAGGTDGV 446          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.460e-42
Identity = 88/141 (62.41%), Postives = 104/141 (73.76%), Query Frame = 3
Query:   15 LVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFV 437
            L+GM  + A+LS +VV TIE+AS S GI V FISIILLPIVGNAAEHAGAIIFAFKNK+DISLG+ LGSATQI++ VVP+ +I+SW+  I MDL+FNLLETGS            QD   HY+KG  L+  Y VI  CFFV
Sbjct:  298 LIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKIDISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFV 438          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 4.638e-41
Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 3
Query:   24 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSD 461
            +TA ++LLS ++V  IE AS SW I +SFIS+ILLPIVGNAAEHAGAI+FA K+KLD+SLGVA+GS+ QI++F VP CV+I W+MG  MDLNF L ET +            Q+GTS+Y KG +L+LCY ++ A FFV   P   D
Sbjct:  295 LTAWVSLLSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPHQDD 440          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 3.007e-40
Identity = 81/151 (53.64%), Postives = 109/151 (72.19%), Query Frame = 3
Query:    9 ACLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSD 461
            A L  +T  +++LSE++V  IE AS+S  + V+FIS+ILLPIVGNAAEHA AI+FA K+KLDI+LGVA+GS+TQI++FV+P CV+I W+MG  MDLNF L ET +            QDG ++Y+KG +L+LCY ++ A FFV   P  SD
Sbjct:  266 AWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSD 416          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39
Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 3
Query:   24 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRP 449
            +TA ++LLS ++V  IE AS SW I ++FIS ILLPIVGNAAEHAGAI+FA K+KLD+SLGVA+GS+ QI++F VP CV+I W+MG  MDLNF L ET              Q+G+S+Y KG +L+LCY ++ A FFV   P
Sbjct:  295 LTAWVSLLSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAFFLQEGSSNYFKGLMLILCYLIVAASFFVHEDP 436          
BLAST of DY258685 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 1.263e-38
Identity = 81/148 (54.73%), Postives = 106/148 (71.62%), Query Frame = 3
Query:   24 MTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDQN 467
            +T  I++LS ++V  I+ AS S  + V+FIS+ILLPIVGNAAEHA AI+FA K+KLDI+LGVA+GS+TQI++FV+P CV+I WIMG  MDLNF L ET +            Q+GTS+Y KG +L+LCY ++ A FFV   P DS  N
Sbjct:  290 LTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDP-DSSNN 436          
The following BLAST results are available for this feature:
BLAST of DY258685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CAX3_ARATH1.435e-5872.84Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1_ARATH2.291e-5666.67Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]
CAX1A_ORYSJ8.150e-5464.85Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX4_ARATH1.699e-5168.28Vacuolar cation/proton exchanger 4 OS=Arabidopsis ... [more]
CAX1B_ORYSJ4.331e-4764.00Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1C_ORYSJ2.460e-4262.41Vacuolar cation/proton exchanger 1c OS=Oryza sativ... [more]
CAX5_ARATH4.638e-4156.16Vacuolar cation/proton exchanger 5 OS=Arabidopsis ... [more]
CAX3_ORYSJ3.007e-4053.64Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]
CAX2_ARATH3.324e-3955.63Vacuolar cation/proton exchanger 2 OS=Arabidopsis ... [more]
CAX2_ORYSJ1.263e-3854.73Vacuolar cation/proton exchanger 2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AB01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258685 ID=DY258685; Name=DY258685; organism=Citrus clementina; type=EST; length=1191bp
GTGGATTTGCTTGTCTTGTTGGGATGACTGCTATCATTGCTTTACTATCA
GAATTTGTAGTGGGCACAATTGAGGATGCTTCAAATTCTTGGGGGATTTC
TGTGAGCTTTATCAGCATTATCTTGCTACCAATTGTTGGAAATGCAGCTG
AACATGCAGGAGCAATCATTTTTGCTTTCAAAAACAAGTTGGACATTTCA
CTGGGTGTTGCGTTGGGTTCTGCAACTCAAATTGCCGTATTTGTGGTTCC
ATTGTGCGTGATTATTTCTTGGATTATGGGGATTACAATGGATCTTAACT
TCAATCTCCTTGAGACTGGCTCTCTTGCTCTAGCAATTATTGCCACAGCC
TTCACTCTACAGGATGGAACTTCTCATTACATGAAAGGATTTGTTCTTCT
GCTATGCTACTTTGTTATTGGAGCATGCTTTTTTGTATCCAACAGACCAC
TCGACTCCGACCAGAATGGGGTCAAAATGGGCCTTCAATCATCAACTGGA
ACAGTCCTCAGAGCATGATAAGACTAATTGGGCCTTCTGGGGTCAGACTC
TTCAATTCGTCATTGAAACTTTCAAATATAAGGTGCATTGCTAATTCTTT
CATTTGGCGTCGCCAGCTGGAATTTAGAAGCCGGGCATAGCATTTTACAT
GTCGAGAAAGTTTCCATGGATGCCTTCTCATTTGAGATGAAACATTTCAA
AGTGAATTGGTGCCATTGAAGCTTGATGAAGGCAGCGCAGGTTTAAGTAT
ATGTAATGTTCTAAAGATCTCTCTCAGATGGTTTTTTTTAACTGAGTGAA
AGTTTATTTCCTATGTCCGGATATGCATTTACTCTTCTTTTGAGTGATGG
TAATTTCTCGGCTCTTGGAACACCCTCCACATAAAAAAATGGGGAATTTT
TTGTCTTTGGGCTTGAATTAAAAAAAAAAAAAAAAAAAAAACCCCCCTTT
TCTGTGACAAAGTTTGGGTTTTTAAAAAAAGCATTGCTTTTCTAATTTTG
TTGCCAAGAAAAAGGGCCCCCATCCAGCCCAAAAAAAATTCCTTTATTTT
CCCCCCCCCCCCCGAAAATCCCCCCTTAGGGGGGGCCCCCAAAAATAAAG
GGGCCCAAACACCGTTTTTTCCTGGGCCACCCCCCCCGGGCCCCGGCCCT
TCCCCAAAAAACCTCCCCTAAAGTGGTTTTTCTTCTGTCCC
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