DY258770

Overview
NameDY258770
Unique NameDY258770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1247
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1233 contig Ccv1_Contig1233:1..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 5.020e-86
Identity = 166/199 (83.42%), Postives = 174/199 (87.44%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNH-TPHPN-NTWIV-DSTSHIQPDELSGPR 588
            VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV            VD D++GNY +EEVEQLIQVALLCTQ SPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFN+ T HP  + WI+ DSTS I+ +  SGPR
Sbjct:  417 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWIIGDSTSQIENEYPSGPR 615          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 2.109e-84
Identity = 154/196 (78.57%), Postives = 171/196 (87.24%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELSGPR 588
            VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQRAFDLARLANDDDVMLLDWV            VD D++ NY E E+EQ+IQVALLCTQGSPMERPKMSEVVRMLEGDGLAE+W+EWQK E+ R++ + +P+PN+ WI+DST ++   ELSGPR
Sbjct:  430 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEWQKVEILREEIDLSPNPNSDWILDSTYNLHAVELSGPR 625          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 6.136e-84
Identity = 154/196 (78.57%), Postives = 167/196 (85.20%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELSGPR 588
            VKAANILLDEEFEAVVGDFGLA+LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQRAFDLARLANDDDVMLLDWV            VD D++ NY E EVEQLIQVALLCTQ SPMERPKMSEVVRMLEGDGLAE+W+EWQK E+ RQ+   + HP + WI+DST ++   ELSGPR
Sbjct:  433 VKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAEKWDEWQKVEVLRQEVELSSHPTSDWILDSTDNLHAMELSGPR 628          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 2.668e-79
Identity = 152/199 (76.38%), Postives = 165/199 (82.91%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHT--PHPNNTWIVD-STSHIQPDELSGPR 588
            VKAANILLDEEFEAVVGDFGLAKLM+Y D+HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ+AFDLARLANDDD+MLLDWV            VD+++EG Y+E EVEQLIQ+ALLCTQ S MERPKMSEVVRMLEGDGLAERWEEWQKEEM   DFN+   PH    W++  S S I+ D  SGPR
Sbjct:  403 VKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGDGLAERWEEWQKEEMPIHDFNYQAYPHAGTDWLIPYSNSLIENDYPSGPR 601          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 2.668e-79
Identity = 152/199 (76.38%), Postives = 165/199 (82.91%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHT--PHPNNTWIVD-STSHIQPDELSGPR 588
            VKAANILLDEEFEAVVGDFGLAKLM+Y D+HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ+AFDLARLANDDD+MLLDWV            VD+++EG Y+E EVEQLIQ+ALLCTQ S MERPKMSEVVRMLEGDGLAERWEEWQKEEM   DFN+   PH    W++  S S I+ D  SGPR
Sbjct:  422 VKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGDGLAERWEEWQKEEMPIHDFNYQAYPHAGTDWLIPYSNSLIENDYPSGPR 620          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 7.053e-64
Identity = 126/196 (64.29%), Postives = 148/196 (75.51%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELSGPR 588
            VKAAN+LLDE+FEAVVGDFGLAKL+D + T+VTT VRGT+GHIAPEYLSTGKSSE+TDVFGYG+MLLEL+TGQRA D +RL  +DDV+LLD V            VD +++G YI+EEVE +IQVALLCTQGSP +RP MSEVVRMLEG+GLAERWEEWQ  E+ R+           W  DS  +    ELSG R
Sbjct:  418 VKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEGEGLAERWEEWQNVEVTRRHEFERLQRRFDWGEDSMHNQDAIELSGGR 613          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.291e-49
Identity = 104/179 (58.10%), Postives = 127/179 (70.95%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTW 537
            VKAANILLDE FEAVVGDFGLAKL++++D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITG RA +  +  +    M L+WV            VD ++   Y   EV +++QVALLCTQ  P  RPKMSEVV+MLEGDGLAERW           D +H  H N ++
Sbjct:  423 VKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAM-LEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEGDGLAERWAA-------SHDHSHFYHANMSY 593          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.383e-43
Identity = 99/197 (50.25%), Postives = 133/197 (67.51%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHT-PHPNNTWIVDSTSHIQPDELSGPR 588
            VKAANILLDE FEA+VGDFGLAKL+D +D+HVTTAVRGTIGHIAPEYLSTG+SSEKTDVFG+GV++LELITG +  D          M+L WV            VD D++G + +  +E+++++ALLCTQ  P  RP+MS+V+++LE  GL E+ E   +        N++  H   ++I+++       ELSGPR
Sbjct:  427 VKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGN-GQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLE--GLVEQCEGGYEARAPSVSRNYSNGHEEQSFIIEAI------ELSGPR 614          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 9.622e-29
Identity = 64/150 (42.67%), Postives = 97/150 (64.67%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 450
            +KA+NIL+D+EF A + DFGLAKL+D  ++H+TT V GT G++APEY +TG  +EK+D++ +GV+LLE ITG+   D  R AN  +V L++W+            VD  +E    +  +++ + V+L C      +RP+MS+V RMLE D
Sbjct:  310 IKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPAN--EVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESD 457          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.143e-28
Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 447
            +KA+N+LLD++  A + DFGLAKL D  +TH++T + GTIG++APEY   G  +EK DV+ +GV+ LE+++G+   +      +D V LLDW             VD  +  +Y EEE   ++ VAL+CT  SP  RP MS+VV ++EG
Sbjct:  806 IKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFR--PTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEG 952          
The following BLAST results are available for this feature:
BLAST of DY258770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
BAK1_ARATH5.020e-8683.42BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK1_ARATH2.109e-8478.57Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK2_ARATH6.136e-8478.57Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK5_ARATH2.668e-7976.38Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH2.668e-7976.38Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5129_ARATH7.053e-6464.29Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH1.291e-4958.10Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.383e-4350.25Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH9.622e-2942.67Probable receptor-like protein kinase At2g42960 OS... [more]
Y1765_ARATH2.143e-2842.28Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258770 ID=DY258770; Name=DY258770; organism=Citrus clementina; type=EST; length=1247bp
GTGAAAGCCGCTAATATATTGTTGGATGAGGAATTTGAAGCTGTTGTTGG
AGATTTCGGGTTGGCTAAACTCATGGATTACAAAGACACACACGTTACAA
CCGCTGTACGTGGAACAATCGGACATATAGCTCCAGAGTACCTCTCTACT
GGAAAGTCGTCAGAGAAGACTGATGTTTTTGGGTATGGAGTCATGCTTCT
TGAACTCATCACGGGGCAGAGAGCTTTTGATCTTGCTCGGCTTGCTAATG
ACGACGACGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAGAAG
AAGTTGGAACAGTTGGTTGATAGCGACATGGAGGGCAACTACATTGAGGA
AGAAGTGGAGCAGCTGATCCAGGTTGCTCTTCTGTGCACACAAGGGTCCC
CAATGGAGCGACCGAAGATGTCAGAGGTGGTAAGAATGCTGGAAGGCGAT
GGATTGGCTGAAAGATGGGAGGAATGGCAGAAAGAAGAGATGTTCCGGCA
AGATTTTAACCATACACCACACCCCAATAATACTTGGATTGTCGACTCAA
CTTCTCACATCCAGCCAGATGAATTGTCTGGTCCTAGATGATATGGAAGT
CTTCTTGATGTGCTTTTTGTATGTGAAAGTGATATTTATAACATTTGTGC
ATATAGGTTCCTTCTTCTTTTTCCCATTTTAATGTCCAGTTTATATTACA
AATTGTACTTGTTTAGGCAATGTTGTAATTTTCTATAGGGTTGCCAAAGT
CTATCGAGGAACTTTAAGTGCTAGCAAACAAGCGGGCATCCTTGTCATGT
CATCTGTGTATTCCAATTTTAGCTAAAATGGTATGAAAATAAGGAGTATA
TGTTTTCTTAACACAACCTTTAAACTTTCTATTTTTTTTTTTAGTTTCCT
GCCGGTGATTTTATCAAAAAAGATAAAAATTTTGGGGGTCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAACCCCACTTTCCTTGTAAAAAGTTGGCCA
TTAAAAAAAAAGCATTTGCTTATTAATTTTGTGGGCACCGGAACAGGGGC
TCCTTCACCGTCCAAAAAAAAAATCAATTATTTTTTCCCCCCCCCCCCCG
TAAATCCCCCCCTAAAGGGGAAGTCCCTATAATAACAGGGGGCCCCAAAA
GGCTGTTTTTTCTCCTCGGCGGCCCACCCCCCCCCGTCCCCCCCCCGTTC
CCTCCTCCTAACAAAAACTTTCCCTTCTTGAGTAGAGTATTTTATAC
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