DY258772

Overview
NameDY258772
Unique NameDY258772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1200
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 442.58 bits (1137), Expect = 2.205e-123
Identity = 224/272 (82.35%), Postives = 241/272 (88.60%), Query Frame = 1
Query:   16 MASTMLSIASATPSASLSMHEKLKGKVKLGSTTNSTAGFIKTKSFGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            MAS MLS+ S     SL   E  K K+KLG  T+++  F+K KSF RV+M  AV  SRFEG+TMAPPDPILGVSEAFKADT+  KLNLGVGAYRTEELQPYVL+VVKKAENLMLERG+NKEYLPIEGLAAFNK TAELLFGA + V+KEQRVAT+QGLSGTGSLRLAAALIERYFPGAKV+ISSPTWGNHKNIFNDA+VPWSEYRYYDPKT+GLDFEGMIADIK AP GSFILLHGCAHNPTGIDPTPEQW KIADVIQEKNHIPFFDVAYQ
Sbjct:    1 MASLMLSLGST----SLLPREINKDKLKLG--TSASNPFLKAKSFSRVTMTVAVKPSRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQ 266          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 432.18 bits (1110), Expect = 2.980e-120
Identity = 219/271 (80.81%), Postives = 235/271 (86.72%), Query Frame = 1
Query:   22 STMLSIASATPSASLSMHEKLK-GKVKLGSTTNSTAGFIKTKSFGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S++LSI    PS SL  ++KLK G   L  +   +  F   KS  R+SMVAAVNVSRFEG+ MAPPDPILGVSEAF+ADT + KLNLGVGAYRTEELQPYVL VV KAENLMLERG+NKEYL IEGLAAFNK TAELL GADN  +K+QRVATVQGLSGTGSLRL AALIERYFPGAKVLIS+PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI DIKAAP G+F+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ
Sbjct:    1 SSLLSI----PSLSLQYNDKLKVGGNSLRFSKEQSNTFSNAKSSCRISMVAAVNVSRFEGIPMAPPDPILGVSEAFRADTSDAKLNLGVGAYRTEELQPYVLKVVNKAENLMLERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 267          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 7.971e-65
Identity = 123/217 (56.68%), Postives = 158/217 (72.81%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VL+VVKKAE +++ ++   KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++    V I  PTWGNH  IF  A +    YRYY+P+T GLDFEGM+ D+ +AP G+ +LLH CAHNPTG+DPT EQWE+I  +++ K+ +PFFD AYQ
Sbjct:    3 SVFANVVRAPEDPILGVTVAYHKDQSPNKLNLGVGAYRTEEGKPLVLNVVKKAEQMLVNDQSRVKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHEHTVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEGMLEDLGSAPLGAIVLLHACAHNPTGVDPTIEQWEQIRQLMRSKSLLPFFDSAYQ 219          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATM_BOVIN (Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 1.041e-64
Identity = 123/228 (53.95%), Postives = 156/228 (68.42%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  PTWGNH  IF DA +    YRYYDPKT G DF G I DI   P  S ILLH CAHNPTG+DP PEQW+++A V+++ N   FFD+AYQ
Sbjct:   20 GLAAAASARASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIAGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTGAIEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATVVKKNNLFAFFDMAYQ 247          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.360e-64
Identity = 121/238 (50.84%), Postives = 158/238 (66.39%), Query Frame = 1
Query:  121 TAGFIKTKSFGRVSMVA-AVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            +A  I    FG+ ++   + N + +  V   P DPILGVS A+  DT   K+NLGVGAYR E  +PYVLD VKKA+  + E   + EY PI G+AAFN++ A+L  G +   +KE+R+ATVQ +SGTG+LR+AA    R+  G    + +PTWGNH  IFNDA +P   Y YY+P T GL+FE M  DI AAP GS ILLH CAHNPTG+DPT EQW+KI+++ +E+ H   FD AYQ
Sbjct:    4 SARLISNIKFGQKNIRQFSTNTNWWANVQKGPEDPILGVSIAYNKDTSPSKINLGVGAYRDENGKPYVLDCVKKADKKIYEANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFARFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSIILLHACAHNPTGVDPTAEQWKKISEICKERGHFVLFDFAYQ 241          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_DICDI (Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.360e-64
Identity = 127/215 (59.07%), Postives = 155/215 (72.09%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP-GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            F  V + P DPILGVS AFKADTD +K++  VGAYR E  +PYVL  V +AE  +L  G  KEYLPI+G+  FNK++A+LL+G D  V KE+R+ TVQ LSGTG+LR+    I +Y P G  V IS P+W NH NI  ++ V  +EY YYDPKT GLDF GMI D++AAP GS  +LH CAHNPTG+DPT EQW  IADV++EKNHIPF D AYQ
Sbjct:   41 FANVPLGPVDPILGVSTAFKADTDPRKVDTSVGAYRDENGKPYVLKCVFEAEKRLL--GAPKEYLPIDGIPEFNKLSAKLLYG-DAMVGKEKRMVTVQALSGTGALRIGIIFIRKYLPAGTVVYISRPSWTNHHNICKESGVQSAEYAYYDPKTKGLDFTGMINDMRAAPNGSVFVLHLCAHNPTGVDPTHEQWNIIADVMREKNHIPFMDCAYQ 252          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.029e-64
Identity = 122/228 (53.51%), Postives = 157/228 (68.86%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHNPTG+DP PEQW++IA V+++KN   FFD+AYQ
Sbjct:   20 GLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQ 247          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 3.956e-64
Identity = 118/217 (54.38%), Postives = 156/217 (71.89%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  +  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VLDVV++ E  +L +   NKEY+PI GLA FNK++A+L+FGAD+  ++E RV TVQGLSGTGSLR+    + +++    + + +PTWGNH  +FN A +    YRYY P T GLDF+G++ D+ +AP GS +LLH CAHNPTG+DPT EQWE+I  +I+ K+ +PFFD AYQ
Sbjct:   16 SVFAHLVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLHACAHNPTGVDPTLEQWEQIRQLIRSKSLLPFFDSAYQ 232          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 8.813e-64
Identity = 121/228 (53.07%), Postives = 157/228 (68.86%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  PTWGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHNPTG+DP PEQW++IA V++++N   FFD+AYQ
Sbjct:   20 GLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQ 247          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.963e-63
Identity = 116/217 (53.46%), Postives = 155/217 (71.43%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F G+  AP DPILGV+ A+  D    K+NLGVGAYRTEE +P VL+VV++AE +++      KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++    + I  PTWGNH  +F  A +    YRYYDP T GLDF+G++ D+ +AP G+ +LLH CAHNPTG+DPT +QWE+I  +++ K  +PFFD AYQ
Sbjct:    5 SVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQ 221          
The following BLAST results are available for this feature:
BLAST of DY258772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AAT5_ARATH2.205e-12382.35Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN2.980e-12080.81Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AATC_DAUCA7.971e-6556.68Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AATM_BOVIN1.041e-6453.95Aspartate aminotransferase, mitochondrial OS=Bos t... [more]
AATM_DICDI1.360e-6450.84Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATC_DICDI1.360e-6459.07Aspartate aminotransferase, cytoplasmic OS=Dictyos... [more]
AATM_MOUSE3.029e-6453.51Aspartate aminotransferase, mitochondrial OS=Mus m... [more]
AAT1_MEDSA3.956e-6454.38Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AATM_HUMAN8.813e-6453.07Aspartate aminotransferase, mitochondrial OS=Homo ... [more]
AATC_ORYSJ1.963e-6353.46Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258772 ID=DY258772; Name=DY258772; organism=Citrus clementina; type=EST; length=1200bp
CGTAAAATCACATAGATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAGTACCGCTACTATGATCCAAAAACAGT
GGGTTTGGATTTTGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGTG
GATCTTTTATTCTGCTTCATGGTTGTGCTCACAACCCCACTGGCATTGAT
CCAACCCCTGAACAATGGGAAAAAATTGCTGATGTCATTCAAGAGAAAAA
TCATATCCCATTTTTCGATGTTGCCTACCAGGTATGATTTCCTGAAATCA
AGATATAAAATGAATCTCAAATGTCATCAGACCTGCTCAAATGGAAGTTA
AAGAAATTTCAAAGTTCATTCCGTAAATTTAACTCTTTGAAGAACCCCCC
CCCACAAAAAAAACCCTTTGAAGTACTTTAGGGAATTTCCAAGTGGAAAC
CCTTTACAAAGAAGCTCCCACCTGTGGAAAATTGGTTGGCCAACCCCGGG
GAAGGGGAGCTTTTCTTGTTGCTCCAATCACATAAAAAAAAAAAACCCTT
GGTTCCTTTATTCACAAAAAAGAAAATGGGAAACAAAATAAAAATGTTTT
GGCCTTGTTTTCCCCCCCCCTCTGAATATTTTAAAACAAAAAAAGGGGAG
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