DY258846

Overview
NameDY258846
Unique NameDY258846
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1245
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258846 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.381e-11
Identity = 54/182 (29.67%), Postives = 84/182 (46.15%), Query Frame = 1 
Query:  355 NVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKVFNLIN**ALIICAYN*LINIFFFWLLMNEQLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLXGAAEMYEDGVMASVDLRF---YVDAHICVFEDVSSYGRYICFHH 867
            +++ AC +  TV ++VFTSS    V    R  P    +DE +W+DV+ C++ K+                       W+         +SKTLAEK A A A + G+ +V+I   LV+GP ++ S P         + G A  Y   ++  V L       DA I +FE+ ++ GRY+C  H
Sbjct:  114 SIMRACKEAGTVRRIVFTSS-AGTVNLEERQRPV---YDEESWTDVDFCRRVKMTG---------------------WMYF-------VSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHY--SILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSH 261
[Close]
BLAST of DY258846 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 9.047e-11
Identity = 52/179 (29.05%), Postives = 79/179 (44.13%), Query Frame = 1 
Query:  358 VLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKVFNLIN**ALIICAYN*LINIFFFWLLMNEQLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--YLXGAAEMYEDGVMAS-------VDLRFYVDAHICVFEDVSSYGRYICFHH 867
            +++AC +  TV + VFTSS   V    H+ N     +DE +WSD+      K+                       W+         +SKTLAEK AW  A ++G+  +SI   LV+GP +T S P   +   + +  +    S       V L    +AHI ++E  ++ GRYIC  H
Sbjct:  110 IMKACVKAKTVRRFVFTSSAGTVNVEEHQKNV----YDENDWSDLEFIMSKKMTG---------------------WMYF-------VSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHIFLYEQAAAKGRYICSSH 256
The following BLAST results are available for this feature:
BLAST of DY258846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DFRA_MAIZE2.381e-1129.67Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_ARATH9.047e-1129.05Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3CH09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258846 ID=DY258846; Name=DY258846; organism=Citrus clementina; type=EST; length=1245bp
TCGAAGAAGAGTTAATTAATTACAACGAGGAGAAGAAATTGAAAGTTTTC
CAGGCAGACCCCTTTGATTACCACAGCCTCGTGAATGCTTTAAAGGGTTG
CTCCGGTCTGTTCTACTCCTTTGAGCCTCCCTCCGACCACTCCACCTACG
ATGTAACACGACTTTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTT
TTTAAATATTTATTATTGCGAGTTTGACATTTTATATTATAAAAATTTTA
TCGATAAATAAATTATTGAATTATAAAATGACTAATAATGAAACGTGACT
TGACTTTCCTGAAAGCAGGAATTGACGGCGGAAGTAGAGACAATGGCAGC
TCACAACGTGCTGGAAGCGTGCGCACAGACAAATACAGTTGACAAAGTCG
TCTTCACGTCTTCTCTAACCGCCGTCGTCTGGAGTAACCACCGTGACAAT
CCGACGTCGCATGACTTCGATGAGCGAAATTGGAGTGACGTCAATTTGTG
CAAGAAATTCAAGGTTTTTAATTTAATTAATTAATAAGCACTAATAATCT
GCGCATATAATTAATTAATTAATATTTTTTTTTTCTGGTTGTTGATGAAC
GAACAGTTATGGCACGGTTTGTCAAAGACGCTGGCGGAGAAGACAGCGTG
GGCCCTAGCGATGGACCGGGGAATAAGCATGGTGTCGATAAACGGAGGGC
TGGTGATGGGTCCAGACGTCACGATCTCGAATCCGTATCTAANAGGAGCG
GCCGAGATGTACGAAGATGGTGTGATGGCTTCGGTGGACCTGAGATTCTA
CGTTGATGCTCACATTTGCGTGTTCGAAGACGTTTCATCGTACGGTCGTT
ATATCTGCTTTCACCACGTCATCAATTGCAACGAAGACGCCATGAAGCTC
GCCCGCATGCTATTGCCACCCTCGACCCTTCAACTCCTCCGCTTAAGGTA
ATATCAGGTATTTCTCAATTAAATATAATGACTCTTGAAAATTTAAATGT
CATCCAAACCTTTAATAATCCTAAAAATAATTTATTTTTTCTATGGTTGG
GTATTCGGAAATTTAAATTTTAAAACCCTCCCCAAATTAAATATAAAAAA
AAGGCAAACCCCAACCTTTTAAGTTTCCAGGGGCAAAAAACCCAAAAAAA
GGGCCTTTGAATTTTGAAAAATTTGCACTCTTTTTTTTTTTTTTGGATAA
TTTTTTTTTTTTGGGGGGCGACGAATTTTTTTTTTGAAGAGGAGA
back to top