DY258863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 1.285e-78 Identity = 144/164 (87.80%), Postives = 153/164 (93.29%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 492 EAFR+GFNQVFDITSLQIFTP ELD+LLCGRRELWE LAEHIKFDHGY AKSPAI+NLLEIMGE T DQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSST+ + A+NG G SE+ADDDLPSVMTCANYLKLPPYSTKEIMYKKL+YAI+EGQGSFDLS Sbjct: 1726 EAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTS-SAAANGAGASETADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS 1888
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 9.594e-50 Identity = 101/164 (61.59%), Postives = 122/164 (74.39%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 492 EAFR+GFNQVF I L+IF EL+ +LCG +L+ + +HIKFDHGYT+ SP + LL+I+ EF +QQRAF QFVTG+PRLP GGLA L+PKLTIVRKH S+S+D DLPSVMTCANYLKLPPYS+KE M +KL+YAI+EGQGSF LS Sbjct: 1352 EAFRSGFNQVFSIEHLRIFNEEELETMLCGECDLFSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGSPRLPHGGLASLSPKLTIVRKHG-------------SDSSDTDLPSVMTCANYLKLPPYSSKEKMKEKLIYAITEGQGSFHLS 1502
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.131e-37 Identity = 86/165 (52.12%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQIFTPHELDHLLCGRR-ELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 492 ++FR GF VF ++ LQ F P ELD LLCG + + W+ L E + DHGYT S A+ L EI+ F +QQR F QFVTG+PRLP GG LNP LTIVRK + +E+ DD LPSVMTC NYLKLP YS+ EIM +KL+ A EGQ SF LS Sbjct: 1839 DSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFES-----------TENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS 1992
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.644e-33 Identity = 81/164 (49.39%), Postives = 99/164 (60.37%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 492 EAF+ GF+ VF TSLQ+ T HEL L E W A L + I DHGYT +SP I LL +M + +QR F QF+TG+ +LP GG A LNP LT+VR+ + P DD LPSVMTC NYLKLP YS+ E++ +L AI EGQGSF LS Sbjct: 1495 EAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNE-----------PPYVPDDYLPSVMTCVNYLKLPEYSSSEVLGSRLSKAILEGQGSFHLS 1647
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.592e-28 Identity = 72/164 (43.90%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 492 +AF GF++VF + I P EL + E W A L ++ +HGYT S I + + I+ F ++R F QF+TG+P+LP GG LNPK T+V KH A +G +AD+ LPSVMTCANYLKLP Y++K+IM +L AI EG G+F LS Sbjct: 1331 KAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKH-------AEDGL----TADEYLPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAFLLS 1483
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 3.108e-24 Identity = 62/157 (39.49%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQIFTPHELDHLLCGRRE-LWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISE 468 EAFR GFN+VF + L F+ E+ +LCG + W + + + GYT SP + + ++ + D+++AF QF TG LPPGGLA L+P+LT+VRK +T D PSV TC +YLKLP YS++EIM ++L+ A E Sbjct: 2465 EAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRKVDAT---------------DASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME 2606
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4) HSP 1 Score: 89.7373 bits (221), Expect = 3.680e-17 Identity = 60/160 (37.50%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQ-IFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 477 +AFR GF+ V + + L+ +F P E++ L+CG R L + AL E ++D GYT S I EI+ FT +Q+R F QF TG R P GGL L K+ I + T + LP+ TC N L LP YS+KE + ++L+ AI+ +G Sbjct: 731 KAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNL-DFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKL--KMIIAKNGPDT----------------ERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKG 871
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.385e-16 Identity = 59/162 (36.42%), Postives = 80/162 (49.38%), Query Frame = 1 Query: 7 FRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 492 F GF Q+ + +F HEL L+ G + + L + + GY A I E+M F+ + Q+ F +FVTG R P G L P I R A +ASN + D LP+ TC N LKLPPY +KE++ KL+YAIS + FDLS Sbjct: 880 FLRGFQQLIPKEWIDMFNEHELQVLISGSVDSLDIDDLRNNTNYAGGYHAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQR-----AAGSASN------ESVDRLPTSATCMNLLKLPPYQSKELLETKLMYAIS-AEAGFDLS 1029
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: UBE3A_MOUSE (Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.385e-16 Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 1 EAFRAGFNQVFDITSLQ-IFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 477 +AFR GF+ V + + L+ +F P E++ L+CG R L + AL E ++D GYT +S I EI+ FT +Q+R F F TG R P GGL L K+ I + T + LP+ TC N L LP YS+KE + +L+ AI+ +G Sbjct: 741 KAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNL-DFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLLFTTGTDRAPVGGLGKL--KMIIAKNGPDT----------------ERLPTSHTCFNVLLLPEYSSKEKLNVRLLKAITYAKG 881
BLAST of DY258863 vs. ExPASy Swiss-Prot
Match: YFK7_SCHPO (Probable E3 ubiquitin protein ligase C167.07c OS=Schizosaccharomyces pombe GN=SPAC167.07c PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.498e-13 Identity = 53/158 (33.54%), Postives = 71/158 (44.94%), Query Frame = 1 Query: 4 AFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 477 AF GF Q+ D L +F E+ L+ G + L H + GY SP IV E++ EF + +R+F +FVT R P G L P I NG + LP+ TC N LKLP YSTK+ + KL+ A+ G G Sbjct: 884 AFTNGFTQIIDPHWLAMFHESEIQILVGGDPVPIDIDDLRRHTVYAGGYEPNSPTIVLFWEVLREFEEEDKRSFVKFVTSVARPPILGFKALMPSFCI-----------RVNGEDETR-----LPTASTCVNLLKLPMYSTKQTLRDKLLTAVRSGVG 1025 The following BLAST results are available for this feature:
BLAST of DY258863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258863 ID=DY258863; Name=DY258863; organism=Citrus clementina; type=EST; length=1213bpback to top |