DY259830

Overview
NameDY259830
Unique NameDY259830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length913
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.046e-56
Identity = 127/225 (56.44%), Postives = 156/225 (69.33%), Query Frame = 3
Query:  138 TAIQTPQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN*TSATQKAKLL 812
            +A +   PA ++ +      FN+LI+ LI RVDL+E EA++SL++LLNEA+EALISAFLVLLRAKGET+ EIVGLARAM+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            DVL+ALGVV+DL PEG+KRCV+EG   F  +  +           R   K   VF+ +GP LNP    ++VVGV +     + AK L
Sbjct:   88 SAAEALPPACANASPSSIKSFNQLIETLIDRVDLSETEAESSLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEEGGIGFM-MSPMYHPAMKIVGPVRKKLKIKTVFNILGPMLNPARVSYAVVGVYHKDLVVKMAKAL 311          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.860e-28
Identity = 82/196 (41.84%), Postives = 112/196 (57.14%), Query Frame = 3
Query:  189 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGV 773
            TP + E++  L++R DLTEAEA  ++  +++ EA +A I+AF V LRAKGE+  E+ GL+  M+  A  V  +G+A+DIVG+GGD A+TVNIST A+I+AAA G  VAK             D+L+ALGV IDL+  GV RC++     F                 R     T VF+ +GP  NP     S VGV
Sbjct:    5 TPSWPEVLSALLARRDLTEAEAAWAMHQIMSGEATDAQIAAFAVALRAKGESAEEVSGLSSVMLALAAPVPPIGEALDIVGSGGDRAHTVNISTMAAIVAAATGVVVAKHGNRAASSACGSADLLEALGVAIDLDGAGVARCIERAGIGFCFAPVFHPSLRYAAVARREIGIPT-VFNFLGPLTNPARPTASAVGV 199          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.385e-26
Identity = 73/190 (38.42%), Postives = 108/190 (56.84%), Query Frame = 3
Query:  210 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN 779
            +  ++++  LT  EA++  + +LN +D   I+AFL +L+ +GET  EI G+  A+ K AT V+    A+DIVGTGGD ANTVNISTG++IL+AACG  +AK             DVL+ALG+ I++ PE +  C+ E    F     +           R   K    F+ +GP LNP   ++S++GV N
Sbjct:    6 LQSIMNQSHLTYDEAESVTNLMLNGSDPHQIAAFLAVLKYRGETPTEIAGMVSALQKQATSVDLPFPALDIVGTGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTPEELLSCIQEVGIGFM-FAPIYHPSLKKLAPIRKGMKIPSTFNILGPLLNPANTEYSLIGVSN 194          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.385e-26
Identity = 74/190 (38.95%), Postives = 108/190 (56.84%), Query Frame = 3
Query:  210 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN 779
            +  ++++  LT  E ++  + +LN AD   I+AFL +L+ +GET  E+ G+  A+ K AT V     A+DIVGTGGD ANTVNISTG++ILAAACG  +AK             DVL+ALG+ I+++PE +  CV E    F     +           R   K   VF+ +GP LNP   +++++GV N
Sbjct:    6 LQSIMNQSHLTYDEVESVTNLMLNGADPHQIAAFLAVLKYRGETPTEVAGMISALQKQATPVNLPFPALDIVGTGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSPEELLSCVQEVGIGFM-FAPIYHPSLKKLAPIRKGMKFPSVFNILGPLLNPANTEYALIGVSN 194          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.435e-25
Identity = 78/192 (40.62%), Postives = 104/192 (54.17%), Query Frame = 3
Query:  207 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN 779
            LI  LI+  DL     + +++ ++  EA  A I+ FLV LRAKGET  E+ GL  AM+++A  ++  G+ +DIVGTGGD  NTVNIST A+++AA  GAKV K             DVL+ALGV +DL+ E V R  +E    F   Q             R  +  T  F+ +GP  NP   Q S VGV N
Sbjct:   17 LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEELAGLVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGVRLDLSIEQVARNAEEAGITFCFAQVFHPSFRHTAVPRRELAVPT-AFNFLGPMTNPAHVQASAVGVAN 207          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_ARTS2 (Anthranilate phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.099e-25
Identity = 79/192 (41.15%), Postives = 103/192 (53.65%), Query Frame = 3
Query:  207 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN 779
            LI  LI+  DLT    + ++D +++ EA  + I+ FLV LR+KGET  EI GL  AM+ +A  V+  G+ +DIVGTGGD  NTVNIST A+++ A  GAKV K             DVL+ALGV +DL  E V R  +E    F   Q             R  +  T  F+ +GP  NP   Q S VGV N
Sbjct:   17 LISALINGADLTADNTEWAMDTIMSGEATPSQIAGFLVALRSKGETVDEIAGLVEAMLAHANPVDIAGEKLDIVGTGGDQLNTVNISTMAALVCAGAGAKVVKHGNRASSSSSGSADVLEALGVRLDLPIERVARNAEEAGITFCFAQVFHPSFRHTAVPRRELAIPT-AFNFLGPLTNPARVQASAVGVAN 207          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.697e-24
Identity = 78/204 (38.24%), Postives = 107/204 (52.45%), Query Frame = 3
Query:  204 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN*TSATQKAKLL 812
            E I  +++R DLT+AEA + ++ ++N  A  A I+AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVL+ LGV I+L+ EGV RC+ +    F    +            R     T VF+ +GP  NP   ++ V+GV +   A + A  L
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMNGTATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLRDAGIGFMFAPKFHPAMRFAGPVRREIGIRT-VFNILGPLTNPARARYQVLGVASAALAEKLANAL 207          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_SACEN (Anthranilate phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 64/139 (46.04%), Postives = 89/139 (64.03%), Query Frame = 3
Query:  207 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDE 620
            L+  L++  DL+  +   ++D ++  EA  A ++AF+V LRAKGET  E+ G+A AM+ ++  +E    AVDIVGTGGD + +VNIST ASI+ AA G  V K             DVL+ALGV IDL PEGV+RCV++
Sbjct:   11 LLGHLVAGNDLSAEDTAWAMDLVMTGEATPARVAAFVVALRAKGETPAEVRGMADAMLSHSRPLEIRRRAVDIVGTGGDRSGSVNISTMASIVVAAAGVPVVKHGNRAASSKCGTADVLEALGVAIDLPPEGVRRCVED 149          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_CHLSY (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 78/204 (38.24%), Postives = 106/204 (51.96%), Query Frame = 3
Query:  204 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN*TSATQKAKLL 812
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVL+ LGV I+L+ EGV RC+ E    F    +            R     T VF+ +GP  NP   ++ V+GV +   A + A  L
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFHPAMRFAGPVRREIGIRT-VFNILGPLTNPARARYQVLGVASAALAEKLAYAL 207          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAA (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 78/204 (38.24%), Postives = 106/204 (51.96%), Query Frame = 3
Query:  204 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN*TSATQKAKLL 812
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVL+ LGV I+L+ EGV RC+ E    F    +            R     T VF+ +GP  NP   ++ V+GV +   A + A  L
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFHPAMRFAGPVRREIGIRT-VFNILGPLTNPARARYQVLGVASAALAEKLAYAL 207          
The following BLAST results are available for this feature:
BLAST of DY259830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARATH2.046e-5656.44Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_ACIC16.860e-2841.84Anthranilate phosphoribosyltransferase OS=Acidothe... [more]
TRPD_CHLFF8.385e-2638.42Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLCV8.385e-2638.95Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_ARTAT5.435e-2540.63Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_ARTS27.099e-2541.15Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_CHLAD2.697e-2438.24Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_SACEN1.025e-2346.04Anthranilate phosphoribosyltransferase OS=Saccharo... [more]
TRPD_CHLSY1.025e-2338.24Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLAA1.025e-2338.24Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YF07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259830 ID=DY259830; Name=DY259830; organism=Citrus clementina; type=EST; length=913bp
TGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTTAATAAT
AATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTGTGGATT
TACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACTGCTATTCAAA
CCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCCTGCTTT
AATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCGGA
GGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTTGA
TTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAGAG
ATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGTGGAAGG
GCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAACA
CAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGGTGCA
AAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGC
TGATGTGTTAAAAGCTTTGGGTGTCGTTATTGACTTGAACCCAGAGGGTG
TAAAAAGGTGTGTGGATGAAGGCAGGAATTGGTTTCATGATGTCCAACAA
GTATCACCCCCGCCTAGAAGTTTGTCCAGCCACTGAAGAATAACCTCCAA
GTAAACACTGGTATTCCACCAAATAGGTCCCAAGTTGAATCCTGGCTGGG
GGCAATTCAGTGTAGTTGGGGTTCTAAATTAAACATCGGCTACTCAAAAG
GCAAAGCTCCTCATTCTAGATGATCAATAAAAATCATCAGTTTCTCAATA
AACAGCTTGAAAGGACACACACCCCTCTGGCTAGAATCTTACCCATTTAC
CCCTCCTTATTTT
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