DY259845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: IPO7_DICDI (Probable importin-7 homolog OS=Dictyostelium discoideum GN=DDB_G0269860 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.697e-50 Identity = 100/253 (39.53%), Postives = 161/253 (63.64%), Query Frame = 3 Query: 6 LDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDE-TPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWKCM 761 L L+ +++FP++CFND D +LW+ DP+E++R ++ + R ++F+ ++V KRG+ NL + F + +Y+ T K R+KDG L+ I L LK YKS LE+ML+ HVFPE SSP G L+A+A + ++ +I F+D F AL ++ + D +LPVRV + ++ + V A + ++E+RPILPQLLD+ F L++E E+EDLV +E+I+ +F E+APYA+ LC+NL+ F + + Sbjct: 349 LSTLIQQVLFPIICFNDRDAELWECDPNEFLRSQFESSMTFATARIEVLNFIIDVVGKRGRANLDMIMGFCIQSLNKYNAATNASEKNPREKDGVLVIISVLSAYLKNISFYKSNLEQMLLLHVFPELSSPHGFLKARACSLFSEFYNIEFTDPVYFSNALKLILGLMSDNDLPVRVKAGTSICNLVRANQGVDELRPILPQLLDKIFSLLSEAESEDLVIAIESIIQRFKHEIAPYAVNLCKNLSEQFLRLL 601
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: IPO7_MOUSE (Importin-7 OS=Mus musculus GN=Ipo7 PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 2.187e-39 Identity = 89/253 (35.18%), Postives = 143/253 (56.52%), Query Frame = 3 Query: 15 LLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGL-RDPELPVRVDSVFALRSFVEACRDLNE-IRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWKCMNT 767 ++ +++FPLMC+ D D++LW EDP+EY+R +D+ ED SP TA+ + KR KE LQK + F I + P R+KDGAL IG+L + L + + YK ++E ML HVFP FSS +G++RA+A WV + + F N + AL L D E+PV+V++ AL+ + E I P + ++ ++ E EN+DL ++ ++ ++ EE+ P A+ + Q+LA F + + T Sbjct: 349 IIQDVIFPLMCYTDADEELWQEDPYEYIRMKFDVFEDFISPTTAAQTLLFTACSKR-KEVLQKTMGFCYQILTEPNADP------RKKDGALHMIGSLAEILLKKKIYKDQMEYMLQNHVFPLFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLIDDREMPVKVEAAIALQVLISNQEKAKEYITPFIRPVMQALLHIIRETENDDLTNVIQKMICEYSEEVTPIAVEMTQHLAMTFNQVIQT 594
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: IPO7_HUMAN (Importin-7 OS=Homo sapiens GN=IPO7 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.187e-39 Identity = 89/253 (35.18%), Postives = 143/253 (56.52%), Query Frame = 3 Query: 15 LLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGL-RDPELPVRVDSVFALRSFVEACRDLNE-IRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWKCMNT 767 ++ +++FPLMC+ D D++LW EDP+EY+R +D+ ED SP TA+ + KR KE LQK + F I + P R+KDGAL IG+L + L + + YK ++E ML HVFP FSS +G++RA+A WV + + F N + AL L D E+PV+V++ AL+ + E I P + ++ ++ E EN+DL ++ ++ ++ EE+ P A+ + Q+LA F + + T Sbjct: 349 IIQDVIFPLMCYTDADEELWQEDPYEYIRMKFDVFEDFISPTTAAQTLLFTACSKR-KEVLQKTMGFCYQILTEPNADP------RKKDGALHMIGSLAEILLKKKIYKDQMEYMLQNHVFPLFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLIDDREMPVKVEAAIALQVLISNQEKAKEYITPFIRPVMQALLHIIRETENDDLTNVIQKMICEYSEEVTPIAVEMTQHLAMTFNQVIQT 594
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: IPO8_HUMAN (Importin-8 OS=Homo sapiens GN=IPO8 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 2.956e-36 Identity = 83/250 (33.20%), Postives = 143/250 (57.20%), Query Frame = 3 Query: 24 EIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGL-RDPELPVRVDSVFALRSFVEACRDLNE-IRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWKCMNT 767 +++F +MC+ D D++LW EDP+EY+R +DI ED SP TA+ + +KR KE L K + F I T + P R+KDGAL IG+L + L + +K ++E L HVFP S +G+LRA++ WV ++ + F ++ N R A+ L D E+PV+V++ AL+S + E ++P + ++ E ++ E EN+D+ ++ ++ ++ +E+A A+ + Q+LA F K + + Sbjct: 353 DVIFSVMCYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKKR-KEVLPKMMAFCYQIL-----TDPNFDP-RKKDGALHVIGSLAEILLKKSLFKDQMELFLQNHVFPLLLSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVELAKKSLIEDKEMPVKVEAALALQSLISNQIQAKEYMKPHVRPIMQELLHIVRETENDDVTNVIQKMICEYSQEVASIAVDMTQHLAEIFGKVLQS 595
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: IPO8_MOUSE (Importin-8 OS=Mus musculus GN=Ipo8 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 5.042e-36 Identity = 89/289 (30.80%), Postives = 153/289 (52.94%), Query Frame = 3 Query: 24 EIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGL-RDPELPVRVDSVFALRSFVEACRDLNE-IRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWKCMNTXXXXXXXXXXXXXXXVGGLRAITPILESVNGPPPLFAQI 884 +++F +MC+ D D++LW EDP+EY+R +DI ED SP TA+ + +K+ KE L K + F I T + P R+KDGAL IG+L + L + +K ++E L HVFP S +G+LRA++ WV ++ + F ++ N R A+ L D E+PV+V++ AL+S + E ++P + ++ E ++ E EN+D+ ++ ++ ++ +++A A+ Q+LA F K + + +G L I IL V P + Q+ Sbjct: 353 DVIFSVMCYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKKK-KEVLPKMMAFCYQIL-----TDPNFDP-RKKDGALHVIGSLAEILLKKSLFKDQIELFLQNHVFPLLMSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVELAKKSLIEDEEMPVKVEAALALQSLISNQAQAKEHMKPYVRFIMQELLHIVRETENDDVTNVIQKLICEYSQDVASIAVDTTQHLAEIFGKVLQS--DEYEEIEDKTVMAMGILHTIDTILTVVEDHPEIIQQL 632
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: IMA3_SCHPO (Probable importin c550.11 OS=Schizosaccharomyces pombe GN=SPCC550.11 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 5.574e-35 Identity = 81/253 (32.02%), Postives = 137/253 (54.15%), Query Frame = 3 Query: 6 LDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDK-LKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWKCM 761 L +L+ VFP +C ++ D++LW+ DP E++ K DI +D S A+ F+ +L KR K + F I +Y +P K RQK+GAL + A+ + L + P ++ LV HV PEF+SPVG+LR++A + +++ I++SD++ A +V++ L+D +LPVR+ + AL+ + + + +P ++ L NEV+ + L +E V F E+ P+A L + L F K M Sbjct: 347 LQLLIGSFVFPQLCMSEEDEELWELDPVEFIHKYIDIYDDFNSADVAASRFLVKLASKRKKYTFMGILSFASDILNQYAASPPNEKNPRQKEGALRMVAAVSNSILSKNSPVAGMMQDFLVAHVMPEFTSPVGYLRSRACEMINRFSEIDWSDKSQLLNAYQAVLNCLQDNDLPVRIQAALALQPLMRHLEVHDVMTAHVPIIMQNLLFLANEVDIDALSSCMEEFVSSFSHELTPFASQLAKQLRNTFVKLM 599
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: NMD5_YEAST (Nonsense-mediated mRNA decay protein 5 OS=Saccharomyces cerevisiae GN=NMD5 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 4.288e-19 Identity = 60/254 (23.62%), Postives = 123/254 (48.43%), Query Frame = 3 Query: 9 DVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRY--DETPVEYKPYRQKDGALLAIGALCDKL-KQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDP--ELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWK 755 +V+L ++FPL+ + +D DP EY+ + D + YSP A++ ++ V KRGK LQ ++F+V + D + Q + L ++ D+L + P+ SE+E+ ++ +V P F S G L+++ + + ++F D V++ L + LPV + + AL++F+ + ++ + + + L N+ E++ + ++ V++F E++ P+ + L L F K Sbjct: 362 NVILQHVIFPLLKPTAETLEAFDNDPQEYINRNMDFWDVGYSPDLAALALLTTCVTKRGKTTLQPTLEFMVSTLQSAVGDYNNIMLDNALQIESCLRIFSSIIDRLITKDSPFASEMEKFILTYVLPFFKSQYGFLQSRVCDICSKLGSMDFKDPVITSTIYEGVMNCLNNSSNSLPVELTAALALQTFISDDQFNMKLSEHVVPTMQKLLSLSNDFESDVISGVMQDFVEQFAEQLQPFGVELMNTLVQQFLK 615
BLAST of DY259845 vs. ExPASy Swiss-Prot
Match: SXM1_YEAST (Importin beta SMX1 OS=Saccharomyces cerevisiae GN=SXM1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 9.886e-16 Identity = 61/251 (24.30%), Postives = 119/251 (47.41%), Query Frame = 3 Query: 6 LDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFS-SPVGHLRAKAAWVAGQYAHINFSDQNNFRKALH-SVVSGLRDPELPVRVDSVFALRSFVEACRDLN-EIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAF 749 L ++ ++FP +C N+ +L ++D EY R+ +DI + +P AS DF+ L+ + E L + FI IF R+D + +++GAL + L + + S LE + + P S L A++ Y+ F D N + + + L LPV++++ A++ + + ++ + +P ++++ KL E + L +E +V++F +E++P+A L NL F Sbjct: 340 LQIIFENVIFPCLCANEQSIELLEDDQEEYTRRYFDINREGSTPDAASADFIF-LIGSKRPEKLNNILPFINDIFTRFDANSSDINMAFKEEGALRTLSNLFSFIDE----PSVLENIFGHFIVPLLSQDKYMFLVARSLETIALYSE-EFKDMNILSQLFELTYTNFLNSNVLPVQIEAADAIKCLIVSNPQIHPAVSAHVPGMMEKLLKLSKIFEIDILSEVMEALVERFSDELSPFAKDLASNLVEQF 584 The following BLAST results are available for this feature:
BLAST of DY259845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259845 ID=DY259845; Name=DY259845; organism=Citrus clementina; type=EST; length=1069bpback to top |