DY259869

Overview
NameDY259869
Unique NameDY259869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1094
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14821 contig Ccv1_Contig14821:2..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY259869 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.533e-11
Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 3 
Query:   18 AIFERYDRDRSGKIDLMELRDALYSIGYAVPPSVLQLLMDKYDNRSGSRKLGLSFDSFVE 197
            +IFER+D+DRSG+ID  ELRDAL S+G++V P +L LL+ K+D +SG R   + +D+F+E
Sbjct:  237 SIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFD-KSGGRNRAIEYDNFIE 295
[Close]
BLAST of DY259869 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.827e-11
Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 3 
Query:   18 AIFERYDRDRSGKIDLMELRDALYSIGYAVPPSVLQLLMDKYDNRSGSRKLGLSFDSFVE 197
            +IFER D+DRSG+ID+ ELRDAL S+G++V P VL LL+ K+D +SG +   + +D+F+E
Sbjct:  256 SIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFD-KSGGKNRAIEYDNFIE 314
The following BLAST results are available for this feature:
BLAST of DY259869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CML49_ARATH1.533e-1153.33Probable calcium-binding protein CML49 OS=Arabidop... [more]
CML50_ARATH5.827e-1153.33Probable calcium-binding protein CML50 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YH10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259869 ID=DY259869; Name=DY259869; organism=Citrus clementina; type=EST; length=1094bp
GCCTTGGTCAACGTTTCGCTATATTTGAGAGATATGATCGAGACAGAAGT
GGGAAAATTGATCTGATGGAATTGAGGGATGCTCTCTACAGCATTGGGTA
TGCAGTCCCACCTTCAGTTCTCCAGCTTTTGATGGACAAGTATGATAATA
GAAGTGGAAGCCGGAAGCTTGGACTCAGTTTCGACAGTTTTGTTGAGTAA
GGCGCCTCTTCCATTAATATCAATAGTTATTTTTGTTTATTCGTTTTCAG
TTTTTTGAGAATTTTGATGTGCTATATTCATGTTGTTCTGTTTAATTTGA
TGTGCAGATGTGGAATGGTTGTAAAGGTGAGTCCACAAATTCCTACTATT
TCTGGCTTTGAAGCTACGTTAGAATAGCTGTTACTGACCACTTCAAATAA
ATTATAATTGGGTCAATCAATCGCCAAAGTTCATGTTATGATGGCAGTTT
GTAAATCTAATTTGCTATGCCAATGTGCATAGACGCCTATGAAAGATAAA
CTCAGTTTTTCTATTTGGAACCTAATAAACATTCTCTGTTTAACAAGTCC
AACTCCCCTCCTTTCATATTCATGCATTTGATCTCATTATGCAAACTTAT
TGTGATTTCAGGGTTTGACTGAAAAATTTCAGGAGAAGGATCCACGGTAT
ACTGGGTCAGCCACGCTTACCTATGAATCATTCATGAGTATAGTCATTCC
ATTTATTGTGTCCTATGATTGATTTTATTTGTACCATTAGCCCTGGCTAT
GTTGATTTCTTTATTGGTAAAGTTCCAATACTTATCCGGGTTTTGAGTTG
TATATTGGAAAATGGAGGGATGAATGTGATATGGGATTCCCTCTTTTTGT
AAAAAAAAAAAAAAAAAAAAAACCCACCTTTCTTGGACAAATTGGCCTTA
AAAAAAACCATTGCTAACTATTTGTTTGCAACGAAACGGGCCCCATCTAT
CAAAAAAAATTTTTTTTTTGCCACTCCGCGAATTTCCCCTATAAGGATTC
TAAATTAAAGGGTCTAAGAGGTTTTTCCCGGGTGCTCCCGGGCCCGTGGC
TTCAAATTTCTCTAGTGTTAATATGGTCCAAAAAAACAATTAAA
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