DY259902

Overview
NameDY259902
Unique NameDY259902
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length894
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.060e-44
Identity = 89/110 (80.91%), Postives = 100/110 (90.91%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEEL 658
            MA   LTRVH LRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPWVALAVR RPGVWEY++V+ HALV+EEL
Sbjct:    1 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEEL 110          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.127e-43
Identity = 88/110 (80.00%), Postives = 99/110 (90.00%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEEL 658
            MA   LTRVH LRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPWVALAVR RPGVWEY++V+ HALV+E L
Sbjct:    1 MATERLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENL 110          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.127e-43
Identity = 89/110 (80.91%), Postives = 100/110 (90.91%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEEL 658
            MA   LTRVH LRERLDETLSA+RNEILALLSRIEGKGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPWVALAVR RPGVWEY++V+ HALV+E L
Sbjct:    1 MATDRLTRVHSLRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVL 110          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.126e-42
Identity = 84/110 (76.36%), Postives = 99/110 (90.00%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEEL 658
            MA   LTRVH L+ERLDETL+A+RNEILALLSR+E KGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPWVALAVR RPG+WEY++V+ HALV+E L
Sbjct:    1 MATERLTRVHSLKERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGIWEYLRVNVHALVVENL 110          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.777e-42
Identity = 88/114 (77.19%), Postives = 98/114 (85.96%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEELLVTQ 670
            MAER LTRVH LRERLDETL A+RNEI+ALLSRI GKGKGI +NHQLIAE E+I E  RK L +GAFGEVLR+ QEAIVLPPWVALAVR RPGVWEYI+V+ HALV+EEL V +
Sbjct:    1 MAERVLTRVHSLRERLDETLVANRNEIVALLSRIIGKGKGICRNHQLIAEVEAIPEATRKKLLDGAFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVPE 114          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.360e-39
Identity = 79/114 (69.30%), Postives = 96/114 (84.21%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEELLVTQ 670
            MAER LTRVH LRERLD TL+AHRNEIL  LSRIE  GKGIL+ HQL+AEFESI +E++  L + AF EVL++TQEAIVLPPWVALA+R RPGVWEY++V+ +AL++EEL V +
Sbjct:    1 MAERVLTRVHSLRERLDATLAAHRNEILLFLSRIESHGKGILKPHQLLAEFESIHKEDKDKLNDHAFEEVLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALIVEELTVPE 114          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 76/114 (66.67%), Postives = 96/114 (84.21%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEELLVTQ 670
            MAER LTRVH LRER+D TL+AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPWVALA+R RPGVWEYI+V+ +ALV+EEL V +
Sbjct:    1 MAERVLTRVHSLRERVDATLAAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKNKLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYIRVNVNALVVEELSVPE 114          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 5.991e-37
Identity = 75/109 (68.81%), Postives = 93/109 (85.32%), Query Frame = 2
Query:  332 AERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEEL 658
            AER +TRVH  RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK L  G F ++L++TQEAIVLPPWVALAVR RPGVWEY++V+ HALV+EEL
Sbjct:    4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEEL 112          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.022e-36
Identity = 75/114 (65.79%), Postives = 95/114 (83.33%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEELLVTQ 670
            MAER LTRVH LRER+D TL AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPWVALA+R RPGVWEY++V+ +ALV+EEL V +
Sbjct:    1 MAERVLTRVHRLRERVDATLCAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKDKLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALVVEELSVPE 114          
BLAST of DY259902 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.476e-35
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 2
Query:  329 MAERALTRVHGLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTE--GAFGEVLRATQEAIVLPPWVALAVRSRPGVWEYIQVDGHALVIEELLVTQ 670
            M E  LTRVH LRER+D TL+ HRNEIL  LSRIE  GKGIL+ HQL+AE+E+IS+E++  L +  GAF EV+++TQEAIV PPWVALA+R RPGVWEY++V+ H LV+EEL V Q
Sbjct:    1 MGEPVLTRVHSLRERMDSTLANHRNEILMFLSRIESHGKGILKPHQLLAEYEAISKEDKLKLDDGHGAFAEVIKSTQEAIVSPPWVALAIRLRPGVWEYVRVNVHHLVVEELSVPQ 116          
The following BLAST results are available for this feature:
BLAST of DY259902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUSY_SOYBN5.060e-4480.91Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_VICFA1.127e-4380.00Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_PHAAU1.127e-4380.91Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_MEDSA2.126e-4276.36Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUSY_ALNGL2.777e-4277.19Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUS2_SOLTU8.360e-3969.30Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUS1_SOLTU2.059e-3766.67Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUS1_ARATH5.991e-3768.81Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_SOLLC1.022e-3665.79Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS1_DAUCA1.476e-3564.66Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259902 ID=DY259902; Name=DY259902; organism=Citrus clementina; type=EST; length=894bp
TTCTTGTTTTCTCTATGCACTCTGTTTTTCTCTTCCTCCCGATCTTCGTC
TTTTCTTTTAGTTTTGAATTCTTCCTCGAGGTCTAAGATCTTGTTCAATG
CTCTATTCTATCCTGTTGAATTACTTGTTCATATTTTACGCTGATTTTAT
TTGACTACCTCTAGAAACTCATTCCTTAAAAGAATCTCCTCTTTTTCTCT
GTTGCCTTTGCTAGAATTTTCTCCCATGCTTTTGTTGGTGGAATACTATG
AAGAAAAAGGATAAAAAAAAAAGAAAAGCTTTGATCCAAAATTTATCCCT
GTTGAAGTTTTTGTTTGTCTGAAAATCAATGGCCGAACGTGCTTTGACCC
GCGTTCACGGTCTCCGCGAGCGTTTGGATGAGACTCTCTCTGCCCACAGG
AATGAAATCTTGGCCCTTTTGTCAAGGATTGAGGGCAAGGGCAAAGGAAT
CTTGCAAAACCATCAACTTATTGCTGAGTTTGAATCAATTTCTGAGGAAA
ACAGAAAGCATCTAACTGAGGGTGCATTTGGTGAAGTTCTAAGAGCCACC
CAGGAAGCAATTGTTTTGCCTCCGTGGGTAGCGCTTGCCGTGCGTTCAAG
GCCCGGTGTGTGGGAGTACATCCAAGTTGATGGTCATGCCCTTGTCATTG
AGGAGCTGCTTGTAACCCAACTAACTGCACTTCGACGAAGAACTTGTCCA
ATGGAGGCTCCAATGGCACCTTCCTGCTTCATTTTGAAATTTGACCCAAT
TCAGGCCTTTTTTCCTCCCCCCCAATTCTTCTAAGTTTAATGAAAGTGGT
AGGAAATTTCTCTACCCCCTCCCCTTCACCCAACTGTTCCGCAGAACAGA
AAACCTCGAACCCCCGGGGTGGAATTTTCCCCCGTCCCACCGCA
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