DY260013

Overview
NameDY260013
Unique NameDY260013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length916
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1391 contig Ccv1_Contig1391:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKB12_VICFA (Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.299e-38
Identity = 66/76 (86.84%), Postives = 73/76 (96.05%), Query Frame = 1
Query:   73 CTGYGKNGDLSQKFWSTKDPGQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYGAGGFPQWGIHPTSL 300
            CTGYGKNGDLSQKFWSTKDPGQ+PFTF+IG+GSVIKGWDEGV+GMQ+GE+ARLRCSPDYAYGAGGFP WGI P S+
Sbjct:   26 CTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVLGMQLGEVARLRCSPDYAYGAGGFPAWGIQPNSV 101          

HSP 2 Score: 27.335 bits (59), Expect = 2.299e-38
Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 3
Query:    3 GIDTLILTPGNGPKPVAGQKVTV 71
            G++  I+  G GP P  GQ VTV
Sbjct:    2 GVEKQIIRAGTGPNPSRGQNVTV 24          
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKB12_ARATH (Peptidyl-prolyl isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.125e-37
Identity = 62/76 (81.58%), Postives = 70/76 (92.11%), Query Frame = 1
Query:   73 CTGYGKNGDLSQKFWSTKDPGQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYGAGGFPQWGIHPTSL 300
            CTG+GK+GDLSQKFWSTKD GQ PF+FQIGKG+VIKGWDEGV+GMQ+GE+ARLRCS DYAYGAGGFP WGI P S+
Sbjct:   26 CTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVIKGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSV 101          

HSP 2 Score: 34.6538 bits (78), Expect = 1.125e-37
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    3 GIDTLILTPGNGPKPVAGQKVTV 71
            G++  ++ PGNGPKP  GQ VTV
Sbjct:    2 GVEKQVIRPGNGPKPAPGQTVTV 24          
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKBP_GIBZE (FK506-binding protein 1 OS=Gibberella zeae GN=FPR1 PE=3 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.700e-12
Identity = 28/47 (59.57%), Postives = 31/47 (65.96%), Query Frame = 1
Query:  133 GQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYGAGGFP 273
            G+  F   IG G VIKGWDEGV  M++GE A L  SPDY YG  GFP
Sbjct:   46 GRGDFVVNIGVGQVIKGWDEGVTQMKLGEKATLHISPDYGYGPRGFP 92          

HSP 2 Score: 33.113 bits (74), Expect = 1.700e-12
Identity = 14/32 (43.75%), Postives = 23/32 (71.88%), Query Frame = 3
Query:    3 GIDTLILTPGNGPKPVAGQKVTVLH--WLREK 92
            G++  I+T G+GP P  GQKVT+ +  WL+++
Sbjct:    2 GVEKTIITQGSGPSPQVGQKVTMEYTGWLQKE 33          
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKBP_ASPOR (FK506-binding protein 1 OS=Aspergillus oryzae GN=fpr1 PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.727e-12
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 1
Query:   94 GDLSQKFWSTKDPGQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYG---AGGFP 273
            G   ++F S++ PG+ P    IG+G VIKGWDEGVM M +GE + L  +PDY YG   AG  P
Sbjct:   39 GFQGKQFDSSRSPGRGPLVVNIGQGKVIKGWDEGVMQMSLGEKSTLTITPDYGYGDKAAGKIP 101          

HSP 2 Score: 29.261 bits (64), Expect = 3.727e-12
Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    3 GIDTLILTPGNGPKPVAGQKVTV 71
            G++  I+T G+GP P +G KV++
Sbjct:    2 GVERKIITRGSGPSPASGDKVSI 24          
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKB12_DROME (12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 1
Query:   97 DLSQKFWSTKDPGQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYGAGGFP 273
            D   KF S++D  + PF F IGKG VI+GWDEGV  + VG+ A+L CSPDYAYG+ G P
Sbjct:   32 DDGTKFDSSRDRNK-PFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHP 89          
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKB1A_EMENI (FK506-binding protein 1A OS=Emericella nidulans GN=fprA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 1
Query:  109 KFWSTKD-PGQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYGAGGFP 273
            KF S++D PG   F  QIG G VIKGWDEGV+ + VGE A+L C+PDYAYGA GFP
Sbjct:   36 KFDSSRDRPGT--FVTQIGVGRVIKGWDEGVLQLSVGEKAKLICTPDYAYGARGFP 89          
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNV (FK506-binding protein 1 OS=Cryptococcus neoformans var. grubii GN=FRR1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 1
Query:  109 KFWSTKDPGQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYGAGGFP 273
            KF S++D G  PF  +IG+G VI+GWDEGV  + VG+ A L C+PDYAYGA GFP
Sbjct:   36 KFDSSRDRGT-PFVCRIGQGQVIRGWDEGVPQLSVGQKANLICTPDYAYGARGFP 89          
BLAST of DY260013 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNE (FK506-binding protein 1 OS=Cryptococcus neoformans GN=FPR1 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1
Query:  109 KFWSTKDPGQHPFTFQIGKGSVIKGWDEGVMGMQVGELARLRCSPDYAYGAGGFP 273
            KF S++D G  PF  +IG+G VI+GWDEGV  + +G+ A L C+PDYAYGA GFP
Sbjct:   36 KFDSSRDRGT-PFVCRIGQGQVIRGWDEGVPQLSIGQKANLICTPDYAYGARGFP 89          
The following BLAST results are available for this feature:
BLAST of DY260013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
FKB12_VICFA2.299e-3886.84Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=... [more]
FKB12_ARATH1.125e-3781.58Peptidyl-prolyl isomerase FKBP12 OS=Arabidopsis th... [more]
FKBP_GIBZE1.700e-1259.57FK506-binding protein 1 OS=Gibberella zeae GN=FPR1... [more]
FKBP_ASPOR3.727e-1249.21FK506-binding protein 1 OS=Aspergillus oryzae GN=f... [more]
FKB12_DROME1.552e-1157.6312 kDa FK506-binding protein OS=Drosophila melanog... [more]
FKB1A_EMENI2.027e-1164.29FK506-binding protein 1A OS=Emericella nidulans GN... [more]
FKBP_CRYNV2.647e-1160.00FK506-binding protein 1 OS=Cryptococcus neoformans... [more]
FKBP_CRYNE3.457e-1158.18FK506-binding protein 1 OS=Cryptococcus neoformans... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YP03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260013 ID=DY260013; Name=DY260013; organism=Citrus clementina; type=EST; length=916bp
TGGGAATAGACACTTTAATTTTGACCCCAGGAAACGGTCCTAAGCCGGTT
GCTGGTCAGAAGGTTACCGTCCTGCACTGGCTACGGGAAAAATGGCGATC
TGTCTCAGAAGTTCTGGAGCACAAAGGATCCTGGGCAGCACCCTTTTACA
TTCCAGATTGGCAAAGGCTCTGTTATAAAAGGATGGGATGAAGGTGTGAT
GGGAATGCAGGTGGGAGAACTTGCTCGTCTGCGGTGCTCCCCAGATTACG
CTTATGGTGCTGGTGGATTTCCACAATGGGGGATTCACCCTACCTCCCTC
CCTGGATCTCCCAGATACATGTCCTGCTCGTAAAATAACCTCTCTCATAA
GGTATACAACCATCTCGCAATCTTATGGTCTTTAAATCCCTTGCCCTACC
CAGGACCCGTACGTATCCTACCCTGAACTCCCGTTAAACCCCCCATGGAC
ACTGCGGAACCAATCTTTTCTTCCCCCTTTCCCCCCCCCCCCTCCGGCAA
CTCTTCAATCACAACAAAAAATACTACACATCACTACTCCTTTCCTTTAC
TATCCCCCTCTATCCTCATACACTTCTCCTCCATCTTTACCCTCAACACG
CCCCCCCCCACACTCCCCCCACCTCCTCCACTCTCACCCATTCCACTCCC
CATCTTCCACTCTAAATCGCTTAATCATTCTTTTCCCTTATCCTCATATC
CTCATCTCACCAATACCACACCTCCATTATACAGACTGTGTACAACTCAT
CAAAACCCCTCAATCCGGATATCAAATCAGCCCCACCGATCGCTTATTCT
CCATCCCTCTTTTCTCATCTCTCTCTTTATCATCAGCCACCCCACACCCC
ACTCATCCACTGAATCCCCAAACGTCGTATTAAAATACGATTAGTACCCC
CACTCTGCGTCCCACT
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