DY260035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260035 vs. ExPASy Swiss-Prot
Match: KCO1_ARATH (Calcium-activated outward-rectifying potassium channel 1 OS=Arabidopsis thaliana GN=KCO1 PE=1 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 1.450e-66 Identity = 139/279 (49.82%), Postives = 185/279 (66.31%), Query Frame = 2 Query: 62 MASNGANQPLL-SGFVDSTSQTNNKDA----PKRRRLRRCRSAPQTDVAALD---INEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIETHKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFYCVCFTIPPLSYGDQSFSTTGGLAFGVVGISSSTMTLAPFYPNLAQVHNEKK 874 M+S+ A PLL + +D+ +Q N ++ ++RRLRR RSAP+ D D I+E +F PN +RV+++LA YL G+L FY V QI G KT+ ++D++YFCIVTMTTVGYGDLVPNS S+LL+CAFVF+GM LVG LS+AADYLV+KQE LLV+A H Q GPTDILKE+ T+K+RYKC GTIFLV+VEKM + AFYCVC T+ L YGD+SF++ G F V I +S++ LA F+ +A+++ E K Sbjct: 1 MSSDAARTPLLPTEKIDTMAQDFNLNSRTSSSRKRRLRRSRSAPRGDCMYNDDVKIDEPPPHPSKIPMFSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAFHLRQSFGPTDILKELHTNKLRYKCYATCLVLVVLFIVGTIFLVMVEKMPVISAFYCVCSTVTTLGYGDKSFNSEAGRLFAVFWILTSSICLAQFFLYVAELNTENK 279
BLAST of DY260035 vs. ExPASy Swiss-Prot
Match: KCO5_ARATH (Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic OS=Arabidopsis thaliana GN=KCO5 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.794e-24 Identity = 75/267 (28.09%), Postives = 129/267 (48.31%), Query Frame = 2 Query: 107 DSTSQTNNKDAPKRRRLRRCRSAPQTDVAALDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVN-SQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKAL--------HRYQKVGPTDILKEIE--THKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFYCVCFTIPPLSYGDQSFSTTGGLAFGVVGISSSTMTLAPFYPNLAQVHNEKK 874 DS S N+ + R L R R+AP V D+ K S K ++ + L YL G +S Y+ N G++T+ ++D++YFCIVTM T+GYGD+ P + +K+ + FV G G + + LS +Y++D QE +++ + H + + D + + E ++R K G + L VE++ FVD+ Y ++ + YGD++F T G F V + ST+ +A + LA+ +++ Sbjct: 68 DSDSDETNRFLSQTRPLHRSRTAPAM-VIIKDLRTKPPETKKPSPVSKSI--IRQAIFLLIVYLTLG-VSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTRQHHQHHHHHRFSAKDYIIDFEKGRMRIRMKVCLALCVVVLCIGVGALVLHFVEELGFVDSVYLSVMSVTTVGYGDRAFKTLQGRLFAAVWLLVSTLAVARAFLYLAEARIDRR 330
BLAST of DY260035 vs. ExPASy Swiss-Prot
Match: KCO6_ARATH (Probable calcium-activated outward-rectifying potassium channel 6 OS=Arabidopsis thaliana GN=KCO6 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.518e-23 Identity = 71/246 (28.86%), Postives = 119/246 (48.37%), Query Frame = 2 Query: 155 LRRCRSAPQTDVAA---LDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQE-ILLVKALHRYQKVGPTDILKEIE--THKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFYCVCFTIPPLSYGDQSFSTTGGLAFGVVGISSSTMTLAPFYPNLAQVHNEKK 874 L R ++AP V I +KD T S S+ ++ L YL G L ++ +T+ ++D +YFCIVTM T+GYGD+ PNSVV+KL S FV G G + + LS Y++D QE +L A R + + +++ ++R K G + +E++ ++D+FY ++ + YGD++F T G F + + ST+ +A + LA+ +K+ Sbjct: 118 LHRSKTAPAMAVINDLHHPIRQKDPTETSRSVV-------RQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTKLFSIMFVLVGFGFIDILLSGMVSYVLDLQESYMLDSAKRRDEPEKRRSYIIDVKKGRMRIRLKVALALGVVVLCIAVGVGIMHFIEEIGWLDSFYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLAVARAFLYLAEARVDKR 356
BLAST of DY260035 vs. ExPASy Swiss-Prot
Match: KCO4_ARATH (Putative outward-rectifying potassium channel 4 OS=Arabidopsis thaliana GN=KCO4 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.856e-21 Identity = 54/201 (26.87%), Postives = 105/201 (52.24%), Query Frame = 2 Query: 275 LVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIETHKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFYCVCFTIPPLSYGDQSFSTTGGLAFGVVGISSSTMTLAPFYPNLAQVHNEKKT 877 ++ L YL G ++ Q G +TN +D+ YF IVT +TVGYGD+VP++ +K+L+ V TG+ + L++ +++ QE ++ +++ + D + E ++++K G +FL V E++ ++D+ Y ++ + YGD++F T G F V + ST+ +A + LA++ ++ T Sbjct: 39 MILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYFSIVTFSTVGYGDIVPSTSTTKILTIVLVSTGVVFLDYLLNRVVSHVLSLQENAILDRINKTRNRAIRDHIAEDGKIRLKWKLCLAFCAVGLCVGSGALFLHVFERLDWLDSVYLSVISVTTVGYGDKTFKTVEGRGFAVFWLLLSTIAMATLFLYLAEMRIDRTT 239
BLAST of DY260035 vs. ExPASy Swiss-Prot
Match: KCO2_ARATH (Probable calcium-activated outward-rectifying potassium channel 2 OS=Arabidopsis thaliana GN=KCO2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.166e-21 Identity = 61/209 (29.19%), Postives = 105/209 (50.24%), Query Frame = 2 Query: 269 RVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKA-------LHRYQKVGPTDILKEIETHKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFYCVCFTIPPLSYGDQSFSTTGGLAFGVVGISSSTMTLAPFYPNLAQVHNEKK 874 + + L YL G L ++ +T+ ++D++YFCIVTM T+GYGD+ P+SVV+KL S FV G G + + LS Y++D QE +++ L+ KV I + ++R K G + + VEK+ ++D+FY ++ + YGD++F+T G + + ST+ +A LA+ +K+ Sbjct: 148 QAVALLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSIFFVLVGFGFMDILLSGMVTYVLDLQENYMLETARNESLNLNDRDKVRSYIIDVKKGRMRIRLKVGLALGVVVLCLGFGVLIMHFVEKIGWLDSFYFSVMSVTTVGYGDRAFNTLAGRLLAAMWLLVSTLAVARAILFLAESRVDKR 356 The following BLAST results are available for this feature:
BLAST of DY260035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260035 ID=DY260035; Name=DY260035; organism=Citrus clementina; type=EST; length=992bpback to top |