DY260047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.154e-19 Identity = 52/107 (48.60%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 93 MTSQFIQNPESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 M SQ P+SI D VKDARG++VDLS YKG LEILAFPCNQFG +EPG N+QI +F CTRFK+EFPIF+KVD+ Sbjct: 1 MASQSTDQPKSIHDFIVKDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYPELTKLYEQYKDKGLEILAFPCNQFGNQEPGDNEQIMEFACTRFKAEFPIFDKVDV 107
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX8_ARATH (Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.571e-19 Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 111 QNPESIFDLSVKDARGHEVDLSTYK---------------------------------GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 + PES+++LS++DA+G+ + LS YK GLEILAFPCNQFG+EEPG+NDQI DFVCTRFKSEFPIF K+++ Sbjct: 4 KEPESVYELSIEDAKGNNLALSQYKDKVLLIVNVASKCGMTNSNYTELNELYNRYKDKGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNKIEV 104
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX1_HELAN (Glutathione peroxidase 1 OS=Helianthus annuus GN=GPXHA-1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.276e-18 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 111 QNPESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 Q+ ++++D +VKDA+G++VDLS YKG EILAFPCNQFG++EPG+N++I DFVCT+FKSEFPIF+K+D+ Sbjct: 4 QSKKTLYDFTVKDAKGNDVDLSVYKGKVVLIVNVASKCGLTNNSYDELNQIYLKYKEKGFEILAFPCNQFGQQEPGTNEEIVDFVCTKFKSEFPIFDKIDV 104
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX6_ARATH (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.848e-18 Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 75 SRADNRMTSQFIQNPESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 SR+++ M + P+S++D +VKDA+G++VDLS YKG EILAFPCNQFG +EPG+N++I F CTRFK+E+PIF+KVD+ Sbjct: 58 SRSEHSMAAS--SEPKSLYDFTVKDAKGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTELAQLYEKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDV 168
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.411e-17 Identity = 46/107 (42.99%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 93 MTSQFIQNPESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 M S P+S+ + V+DARG++VDLS YKG LEILAFPCNQFG +EPGSN+++ +F CTRFK+E+PIF+KVD+ Sbjct: 1 MASDSSAQPKSVHEFVVRDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTEMTELYEKYRELGLEILAFPCNQFGNQEPGSNEEVLEFACTRFKAEYPIFDKVDV 107
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX4_CITSI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.411e-17 Identity = 47/101 (46.53%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 111 QNPESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 Q+ S+ D +VKDA+G +VDLS YKG LEILAFPCNQFG +EPG N+QI +F CTRFK+EFPIF+KVD+ Sbjct: 4 QSKTSVHDFTVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 104
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.104e-17 Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 117 PESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 P+SI+D +VKDA+G++VDLS YKG LEILAFPCNQFG +EPGS ++I + VCTRFK+E+PIF+KVD+ Sbjct: 8 PQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDMTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDV 106
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.104e-17 Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 117 PESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 P+SI+D +VKDA+G++VDLS YKG LEILAFPCNQFG +EPGS ++I + VCTRFK+E+PIF+KVD+ Sbjct: 8 PQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDV 106
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX4_SOLLC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum GN=GPXle-1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17 Identity = 45/100 (45.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 114 NPESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKVDM 314 NP+S++D +VKDA+G +VDLS YKG LEILAFPCNQFG +EPG+ + I VCTRFK+E+PIF+KVD+ Sbjct: 7 NPQSVYDFTVKDAKGKDVDLSIYKGKVLIIVNVASQCGLTNSNYTDMTELYKKYKDQGLEILAFPCNQFGGQEPGNIEDIQQMVCTRFKAEYPIFDKVDV 106
BLAST of DY260047 vs. ExPASy Swiss-Prot
Match: GPX4_GOSHI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.741e-16 Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 3 Query: 117 PESIFDLSVKDARGHEVDLSTYKG---------------------------------LEILAFPCNQFGEEEPGS-NDQIADFVCTRFKSEFPIFEKVDM 314 P+SI+D +VKDA+G++VDLS YKG LEILAFPCNQFG +EPGS + I + VCTRFK+E+PIF+KVD+ Sbjct: 8 PQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEESIQNMVCTRFKAEYPIFDKVDV 107 The following BLAST results are available for this feature:
BLAST of DY260047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260047 ID=DY260047; Name=DY260047; organism=Citrus clementina; type=EST; length=902bpback to top |