DY260102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260102 vs. ExPASy Swiss-Prot
Match: Y5483_ARATH (Uncharacterized GTP-binding protein At5g64813 OS=Arabidopsis thaliana GN=At5g64813 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.880e-40 Identity = 93/187 (49.73%), Postives = 110/187 (58.82%), Query Frame = 2 Query: 254 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKSSLVNLIVKGSSFSRPSQTIGCTVGVKHITYXXXXXXXXXXXXXXERDFFVELWDISRPERYKDCRSILYSQSMVLFLFLIRPRKKTKTACRSGQLKLPQLEPFPAPPRSWGSRCPSRA*VVIGNKAEVAAXXXXXXXXXXXXDPPPSWGEKPG 814 FW+ERERENKE P GQVRVLVVGDSGVGK+SLV+LI KGSS RP QTIGCTVGVKHITY ERDFFVELWD+S ERYKDCRS+ YSQ + +++TKT+ + ++ F AP S G +V+GNKA++AA D W EK G Sbjct: 3 FWRERERENKEQILAPLCGQVRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVKHITYGSPASSSSSIQGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWASEVAATGTFSAPLPSGGPGGLPVPYIVVGNKADIAAKEGTKGSSGNLVDAARHWVEKQG 189
BLAST of DY260102 vs. ExPASy Swiss-Prot
Match: RABL3_DANRE (Rab-like protein 3 OS=Danio rerio GN=rabl3 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.910e-11 Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 2 Query: 311 QVRVLVVGDSGVGKSSLVNLIVKGSSFSRPSQTIGCTVGVKHITYXXXXXXXXXXXXXXERDFFVELWD----ISRPERYKDCRSILYS 565 +V+VLV+GDSGVGKSSLV+L+ + PS T+GC+V V+ Y E+ F++ELWD + K R++ Y+ Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDY--------REGTPEEKAFYIELWDVGGSVGSASSVKSTRAVFYN 86 HSP 2 Score: 30.0314 bits (66), Expect = 1.910e-11 Identity = 16/47 (34.04%), Postives = 25/47 (53.19%), Query Frame = 1 Query: 556 FVFPINGVIFVPDPSQKKDKNSLQKWAVEIATIGTFSRPSSLLGVPV 696 F +NG+I V D + KK +L +W++E S+ SS G+ V Sbjct: 84 FYNSVNGIILVHDLTNKKSSQNLYRWSLE-----ALSKDSSPTGIIV 125
BLAST of DY260102 vs. ExPASy Swiss-Prot
Match: RABL3_XENTR (Rab-like protein 3 OS=Xenopus tropicalis GN=rabl3 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 7.039e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 2 Query: 311 QVRVLVVGDSGVGKSSLVNLIVKGSSFSRPSQTIGCTVGVKHITYXXXXXXXXXXXXXXERDFFVELWD----ISRPERYKDCRSILYS 565 +V+VLV+GDSGVGKSSLV+L+ + PS T+GC+V V+ Y E+ +++ELWD + K R++ Y+ Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRLHEY--------REGTPEEKTYYIELWDVGGSVGSASSVKSTRAVFYN 86 HSP 2 Score: 28.8758 bits (63), Expect = 7.039e-11 Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 1 Query: 556 FVFPINGVIFVPDPSQKKDKNSLQKWAVE 642 F +NG+I V D + KK +L +W++E Sbjct: 84 FYNAVNGIILVHDLTNKKSSQNLYRWSLE 112
BLAST of DY260102 vs. ExPASy Swiss-Prot
Match: RABL3_BOVIN (Rab-like protein 3 OS=Bos taurus GN=RABL3 PE=2 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 7.039e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 2 Query: 311 QVRVLVVGDSGVGKSSLVNLIVKGSSFSRPSQTIGCTVGVKHITYXXXXXXXXXXXXXXERDFFVELWD----ISRPERYKDCRSILYS 565 +V+VLV+GDSGVGKSSLV+L+ + PS T+GC+V V+ Y E+ +++ELWD + K R++ Y+ Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDY--------KEGTPEEKTYYIELWDVGGSVGSASSVKSTRAVFYN 86 HSP 2 Score: 28.8758 bits (63), Expect = 7.039e-11 Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 1 Query: 556 FVFPINGVIFVPDPSQKKDKNSLQKWAVE 642 F +NG+I V D + KK +L +W++E Sbjct: 84 FYNSVNGIILVHDLTNKKSSQNLYRWSLE 112
BLAST of DY260102 vs. ExPASy Swiss-Prot
Match: RABL3_MOUSE (Rab-like protein 3 OS=Mus musculus GN=Rabl3 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 7.039e-11 Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 2 Query: 311 QVRVLVVGDSGVGKSSLVNLIVKGSSFSRPSQTIGCTVGVKHITYXXXXXXXXXXXXXXERDFFVELWD----ISRPERYKDCRSILYS 565 +V+VLV+GDSGVGKSSLV+L+ PS T+GC+V ++ Y E+ +++ELWD + K R++ Y+ Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDY--------KEGTPEEKTYYIELWDVGGSVGSASSVKSTRAVFYN 86 HSP 2 Score: 30.0314 bits (66), Expect = 7.039e-11 Identity = 11/30 (36.67%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 556 FVFPINGVIFVPDPSQKKDKNSLQKWAVEI 645 F +NG+I V D + KK +L +W++E+ Sbjct: 84 FYNSVNGIILVHDLTNKKSSQNLYRWSLEV 113 The following BLAST results are available for this feature:
BLAST of DY260102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260102 ID=DY260102; Name=DY260102; organism=Citrus clementina; type=EST; length=840bpback to top |