DY260105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260105 vs. ExPASy Swiss-Prot
Match: COG2_HUMAN (Conserved oligomeric Golgi complex subunit 2 OS=Homo sapiens GN=COG2 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.770e-21 Identity = 49/165 (29.70%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 15 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFSNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLD-----ISSAQNSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYQSSLDFLAYLEGYCPSRSAVAK 494 +L SL + GL+ + ++I +CLR YA ID TR+AE + +V P + ++I E + + L+ Y ++ + V C+ L + ISS + + + +DFL NS+ +++ +++ P F+PG P F Y S+DF+ LE C S+++V + Sbjct: 206 MLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVI----IEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGSQASVKR 366 HSP 2 Score: 35.039 bits (79), Expect = 1.770e-21 Identity = 14/28 (50.00%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 502 AEAIYVDFMKQWNVGVYFSLRFQEITGA 585 A Y F K+WN+ VYF +RF+EI G+ Sbjct: 369 AHPAYHSFNKKWNLPVYFQIRFREIAGS 396
BLAST of DY260105 vs. ExPASy Swiss-Prot
Match: COG2_MOUSE (Conserved oligomeric Golgi complex subunit 2 OS=Mus musculus GN=Cog2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.188e-19 Identity = 46/165 (27.88%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 15 LLDASLGHCFVHGLEHQNANVIYNCLRAYAAIDNTRNAEEIFSNTVVAPLMQKIIPHGPSEALAGASGDELESDYEQIKQCVEKDCKFLLDI-----SSAQNSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTQFLRNYQSSLDFLAYLEGYCPSRSAVAK 494 +L SL + GL+ + +++ +CLR YA ID T++AE + +V P + ++I E + L+ Y ++ + V C+ L ++ SS + + + +DFL NS+ E++ +++ P F+PG P F + Y S+DF+ E C S+++V + Sbjct: 206 MLQQSLEGLLLEGLQTSDVDIVRHCLRTYATIDKTQDAEALVGQVLVKPYVNEVIV----EQFVESHPSGLQLMYNKLLEFVPHHCRLLREVTGGAVSSEKGTIVPGYDFLVNSVWPEIVRGLEEKLPSLFNPGDPDAFHQKYTVSMDFVQRFERQCGSQASVKR 366 HSP 2 Score: 33.4982 bits (75), Expect = 1.188e-19 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 502 AEAIYVDFMKQWNVGVYFSLRFQEITGA 585 A Y +F +WN+ VYF +RF+E+ G+ Sbjct: 369 AHPAYHNFSNKWNLPVYFQIRFREVAGS 396 The following BLAST results are available for this feature:
BLAST of DY260105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260105 ID=DY260105; Name=DY260105; organism=Citrus clementina; type=EST; length=1100bpback to top |