DY260113
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 1.623e-94 Identity = 178/245 (72.65%), Postives = 202/245 (82.45%), Query Frame = 3
Query: 36 MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQVLPAIV*GK*ICPFTCPTILDVLQTIFKIPAREKG 770
M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGT +KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E+VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEHLVTLLAVVPKYSQKDWLA YETLT+Y P+ + +T T+ + F+I AREKG
Sbjct: 1 MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLLKSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEVVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEHLVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTV-TLFTRVADNFRIAAREKG 244
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC_HORVU (V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 2.972e-80 Identity = 164/292 (56.16%), Postives = 205/292 (70.21%), Query Frame = 3
Query: 36 MASRYWVVSLPV--QNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQVLPAIV*GK*ICPFTCPTILDVLQTIFKIPAREKGLPNS*FLNIVPKAQKNL*SRNLEKINSPTQKSLESFPFCMGS 896
MA+RYW+ +LPV N AA ++W RLQE IS+HSFDTPLYRF +P+LR GT VKSN F+E VSHKIRRQIE+LER G+E +L+VDGVPVD+YLTRFVWDE KYP +PL+E V I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+GSLAVRDLSNL+KPED++TSEHLVTLL++VPKYSQKDWLASYE+L + P+ + +T V+ FK+ AREKG F P+AQ++ + LEK+ Q+ + + P MG+
Sbjct: 1 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTLDSLLALSDDLVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVNAPLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDMVTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN-FKVHAREKGFQIRDF-EYSPEAQESR-KQELEKL-LQDQEVMRTSPIAMGA 288
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VTC1A_DANRE (V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.097e-34 Identity = 76/210 (36.19%), Postives = 123/210 (58.57%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W++L ++ + + +FNIP+L+VGT K ++FVESV K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V++I++DLK R + YNN++ L + RK +GSL R L+++VK +D ++ SE+L+TLL VVPK + DW +YETL P+
Sbjct: 2 TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKLDAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNISEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYTDWQRTYETLAEMVVPR 211 HSP 2 Score: 26.9498 bits (58), Expect = 1.097e-34 Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRS+ LL+E+++ V LF
Sbjct: 207 MVVPRSTNLLFEDHDSGLFTVTLF 230
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC1_PONAB (V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.156e-34 Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL P+
Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPR 211 HSP 2 Score: 23.0978 bits (48), Expect = 3.156e-34 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRSS +L E+ + V LF
Sbjct: 207 MVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC1_MACFA (V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.156e-34 Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL P+
Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPR 211 HSP 2 Score: 23.0978 bits (48), Expect = 3.156e-34 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRSS +L E+ + V LF
Sbjct: 207 MVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC1_HUMAN (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4) HSP 1 Score: 144.436 bits (363), Expect = 3.156e-34 Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL P+
Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPR 211 HSP 2 Score: 23.0978 bits (48), Expect = 3.156e-34 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRSS +L E+ + V LF
Sbjct: 207 MVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC1_BOVIN (V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 9.083e-34 Identity = 77/210 (36.67%), Postives = 119/210 (56.67%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL P+
Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPR 211 HSP 2 Score: 23.0978 bits (48), Expect = 9.083e-34 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRSS +L E+ + V LF
Sbjct: 207 MVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC1_RAT (V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.183e-33 Identity = 77/210 (36.67%), Postives = 118/210 (56.19%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL P+
Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPR 211 HSP 2 Score: 23.0978 bits (48), Expect = 1.183e-33 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRSS +L E+ + V LF
Sbjct: 207 MVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC1_MOUSE (V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4) HSP 1 Score: 142.51 bits (358), Expect = 1.183e-33 Identity = 77/210 (36.67%), Postives = 118/210 (56.19%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL P+
Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPR 211 HSP 2 Score: 23.0978 bits (48), Expect = 1.183e-33 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRSS +L E+ + V LF
Sbjct: 207 MVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC1_XENLA (V-type proton ATPase subunit C 1 OS=Xenopus laevis GN=atp6v1c1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.404e-33 Identity = 75/210 (35.71%), Postives = 120/210 (57.14%), Query Frame = 3
Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQ 665
+ +W++S P + + W +L +K++ + +FNIP+L+VGT K ++FVE K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+L+TLL VVPK + DW+ YETL+ P+
Sbjct: 2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGAVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYTDWMKEYETLSEMVVPR 211 HSP 2 Score: 23.0978 bits (48), Expect = 3.404e-33 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1
Query: 652 MVVPRSSQLLYEENEYAPLPVPLF 723
MVVPRSS +L E+ + V LF
Sbjct: 207 MVVPRSSNVLSEDQDSYLCNVTLF 230 The following BLAST results are available for this feature:
BLAST of DY260113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260113 ID=DY260113; Name=DY260113; organism=Citrus clementina; type=EST; length=1192bpback to top |