DY260162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 2.659e-90 Identity = 146/216 (67.59%), Postives = 181/216 (83.80%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGKWIWAKMFL 693 SSA ACDRC+H +K AYFS ASALSSGAC YGS+A F GH+AA +PS+YKDG+GCGACFQ+RCKNPTLCS KGT VI+TDLN +NQTD V+SSRAF A++ G +D+LK G+VD+EY+RVPC+Y N+ + VRVEESS PNYLA+K+LYQGGQTE+VA+ +AQVGSS+W YM+R++GAVW T +VPNGALQFRFVVT+ YDGK +W++ L Sbjct: 17 SSAAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVL 232 HSP 2 Score: 36.5798 bits (83), Expect = 2.659e-90 Identity = 14/28 (50.00%), Postives = 22/28 (78.57%), Query Frame = 3 Query: 681 KNVPPADWKPGMNYNSGVPIPDIAKKGC 764 + V PA+W+ G +Y++GV I DIA++GC Sbjct: 229 QRVLPANWEAGKSYDAGVQITDIAQEGC 256
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 3.794e-89 Identity = 147/217 (67.74%), Postives = 182/217 (83.87%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSS-NWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGKWIWAKMFL 693 SS ACDRC+H++K AYFS ASALSSGAC YGS+A SF GH+AA +PS+YKDGAGCGACFQ+RCKNP LCS KGT V++TDLN SNQTD V+SSRAF A++ G +D+LK G+VD+EY+RVPC+Y N+N+ VRVEE+S KPNYL +K+LYQGGQTE+V++D+AQVGSS NWGYM+R++GAVW T +VP GA+QFRFVVT YDGK IW++ L Sbjct: 16 SSVNACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVL 232 HSP 2 Score: 34.2686 bits (77), Expect = 3.794e-89 Identity = 13/28 (46.43%), Postives = 22/28 (78.57%), Query Frame = 3 Query: 681 KNVPPADWKPGMNYNSGVPIPDIAKKGC 764 ++V P++W+ G Y++GV I DIA++GC Sbjct: 229 QSVLPSNWEAGKIYDAGVQITDIAQEGC 256
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 4.539e-87 Identity = 143/216 (66.20%), Postives = 174/216 (80.56%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQD--ILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGKWIWAKMFL 693 SS ACDRC+H++K +YFS ASALSSGAC YG +A SF GH+AA +PS+YKDGAGCGACFQ+RCKNP LC+ KGT V++TDLN SNQTD V+SSRAF A++ G D +LK G+VDVEY+RVPC Y +NL VRVEE+S KPNYLA+K+LYQGGQTE+V +D+A VGSS W YMSR++GAVW T +VP GALQF+F VT YDGK +W+K L Sbjct: 16 SSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVL 231 HSP 2 Score: 36.1946 bits (82), Expect = 4.539e-87 Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 681 KNVPPADWKPGMNYNSGVPIPDIAKKGC 764 K V PA+W G Y++GV I DIA++GC Sbjct: 228 KRVLPANWNSGRIYDAGVQITDIAQEGC 255
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLA3_ORYSJ (Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.003e-68 Identity = 114/213 (53.52%), Postives = 147/213 (69.01%), Query Frame = 1 Query: 58 ATACDRCVHQTKVAYFSQASAL---SSGACGYGSLALSF--NGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGKWIWA 681 A+AC+RCV K AY S L G CGYG++A+ NGG LAAG P ++ G GCG CFQMRC+N +CS G RV+LTD + SN TDF++ AF L+ G + KL + VEY+R+PC+YK++NL++ VEE S +PN L +K LYQGGQT+++A+DVAQVGSS+W +M+R YG VW R PNG LQFR VVT YDGKW+WA Sbjct: 26 ASACERCVRNGKAAYSPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDALSVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWA 238 HSP 2 Score: 34.6538 bits (78), Expect = 1.003e-68 Identity = 12/28 (42.86%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 681 KNVPPADWKPGMNYNSGVPIPDIAKKGC 764 + V PA+W+PG Y++G I D+A++ C Sbjct: 240 REVLPANWQPGQVYDTGARIADVARESC 267
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.900e-68 Identity = 116/212 (54.72%), Postives = 154/212 (72.64%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS-NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGKWIWA 681 S + CDRCV ++K + + AL++G+CGYGSLA SFNGGHLAA P+L++ G GCGACFQ+RCK+ LCS G +V++TD S N+TD V+S+ A+ A++ G + VDVEYKRVPCEY +NL++RVEE S P L+++ LYQGGQT++VA+DVA VGSSNW +M+R+YG W T++ P G LQFR VVT YDGKW+WA Sbjct: 26 SMVSGCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWA 237 HSP 2 Score: 30.4166 bits (67), Expect = 2.900e-68 Identity = 12/26 (46.15%), Postives = 17/26 (65.38%), Query Frame = 3 Query: 687 VPPADWKPGMNYNSGVPIPDIAKKGC 764 V P W G Y++GV I D+A++GC Sbjct: 241 VLPRRWTAGRVYDAGVQIADVAQEGC 266
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 4.930e-68 Identity = 111/209 (53.11%), Postives = 153/209 (73.21%), Query Frame = 1 Query: 58 ATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGG-HLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGKWIWA 681 A+ CDRCV +++ AY++ + L++G+CGYG+ A +FNGG LAA P+LY+ G GCGAC+Q+RCK+ LCS G RV++TD +N+T V+SS AF A++ G + +L VDVEYKRVPCEY++++L+VRV+E S PN L + LYQGGQT++VA+DVAQVGSS+W +M+R +G W + P G LQ R VVT YDGKW+WA Sbjct: 33 ASGCDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWA 241 HSP 2 Score: 32.3426 bits (72), Expect = 4.930e-68 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 681 KNVPPADWKPGMNYNSGVPIPDIAKKGC 764 + V P W+ G Y++GV I DIA++GC Sbjct: 243 REVLPRRWRAGEVYDTGVQITDIAQEGC 270
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLA4_ORYSJ (Expansin-like A4 OS=Oryza sativa subsp. japonica GN=EXLA4 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.328e-41 Identity = 86/236 (36.44%), Postives = 138/236 (58.47%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYF----SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDL-------NHSNQT-----DFVISSRAFMALSNQG-KGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGS--------SNWGYMSRNYGA--VWDTSRVPNGALQFRFVVTSRYDGKWI 675 ++A +CD C + + A+ L+ GACG+G+ + N +AA L++ G CGAC+Q+RC++ LC G +V++ D+ N+T F I+ AF A++ QG ++ + ++V+++R+PCEY+ ++ LAVRVEE+S P +LA++ LYQGGQT++ A+++AQ + S+W YM+R GA VW TSR P G L+ R VVT+ GKW+ Sbjct: 30 AAAHSCDWCTPRHSTVSILPTPTHAAHLTGGACGFGAAPMELN---VAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATPPSSSYYSSWRYMTRRDGAPGVWTTSRAPVGPLRLRVVVTAGSGGKWL 262 HSP 2 Score: 34.6538 bits (78), Expect = 4.328e-41 Identity = 13/29 (44.83%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 687 VPPADWKPGMNYNSGVPIPDIAKKGCPQS 773 V PADW+PG Y++G+ + D+A + C S Sbjct: 268 VLPADWRPGEVYDTGLRVTDVAVRSCSLS 296
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.688e-37 Identity = 72/182 (39.56%), Postives = 102/182 (56.04%), Query Frame = 1 Query: 130 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGKWI 675 G CGYG N G ++ L+ +G GCGAC+Q+RCK P CS +G V+ TD + TDF++S +A+ ++ G + GVV+VEY+R+PC Y NL ++ E S P+YLA+ VLY GG +++A++V Q W M R +GAV D P G L RF+V WI Sbjct: 46 GHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWI 227 HSP 2 Score: 23.483 bits (49), Expect = 2.688e-37 Identity = 8/17 (47.06%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 684 NVPPADWKPGMNYNSGV 734 N PADW G Y+S + Sbjct: 231 NAIPADWTAGATYDSNI 247
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 1.016e-36 Identity = 79/204 (38.73%), Postives = 119/204 (58.33%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYF--SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ-GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTS 654 S ATA D ++ AY+ S +GAC YG+ + N G ++A SLY+DG GCGAC+Q+RC NP CS G +++TD S+ TDF++S AF ++ G +L LGVV +EY+RV C Y N+N+ ++ ESS PNYL ++ YQ G +++A+ + + + +SR +GAVW P+G L R + +S Sbjct: 20 SKATA-DANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASA-SLYRDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSS 221
BLAST of DY260162 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 2.564e-27 Identity = 65/180 (36.11%), Postives = 99/180 (55.00%), Query Frame = 1 Query: 130 GACGY-GSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH-----SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGS-SNWGYMSRNYGAVWDTSRVPNGALQFRFVV 648 GACGY G++ + +AAG PS+YK G GCG+C+Q++C + CSG V+LTD S F +S AF A++N G+ + GV+ ++Y RVPC + L V+ S PNY AV V Y+ G ++ +++ Q G+ + W M +++GAVW + ALQ F + Sbjct: 56 GACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGS-NPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLN--AGSALQAPFSI 232 HSP 2 Score: 27.7202 bits (60), Expect = 2.564e-27 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3 Query: 675 LGKNVPPADWKPGMNYNSGV 734 + NV P+ WKPGM+Y S V Sbjct: 243 VASNVIPSGWKPGMSYISTV 262 The following BLAST results are available for this feature:
BLAST of DY260162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260162 ID=DY260162; Name=DY260162; organism=Citrus clementina; type=EST; length=1067bpback to top |