DY260183

Overview
NameDY260183
Unique NameDY260183
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1105
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.912e-38
Identity = 77/128 (60.16%), Postives = 85/128 (66.41%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  E P  LD++YRK+                            YLK  F+GANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA GIILLFQDDKVSGL L KDG W+DVPP+ HSIVV+LGD
Sbjct:   99 RHRPTSNISEVPD-LDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGD 225

HSP 2 Score: 27.7202 bits (60), Expect = 4.912e-38
Identity = 17/61 (27.87%), Postives = 30/61 (49.18%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSLPPQPRNLIPRPFPHPPRLTQKPTKTQVTPRF 663
            ++VI NG+YKSV    I+QT      + S      + +   +P P  + ++  K +  P+F
Sbjct:  227 LEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAV--IYPAPTLVEKEEEKCRAYPKF 285
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.400e-38
Identity = 75/128 (58.59%), Postives = 85/128 (66.41%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  E P  L+++YR V                           GYLKK F+G NGPTFGTKVSNYPPCP P+LIKGLRAHTDA G+ILLFQDDKVSGL L KDGQWIDVPP+ HSIV++LGD
Sbjct:   93 RHLPKSNISEVPD-LEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGD 219

HSP 2 Score: 30.0314 bits (66), Expect = 6.400e-38
Identity = 21/63 (33.33%), Postives = 31/63 (49.21%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSLPPQPRNLIPRPFPHPPRLTQKPT--KTQVTPRF 663
            ++VI NG+Y+SVE   I+QT      + S      + +  P    P L +K    K QV P+F
Sbjct:  221 LEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYP---APTLVEKEAEEKNQVYPKF 280
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.843e-37
Identity = 79/128 (61.72%), Postives = 86/128 (67.19%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  E P  LD+EYR+V                           GYLKK F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDA GIILLFQDDKVSGL L KDGQWIDVPP+ HSIVV+LGD
Sbjct:   93 RHLPVSNISEVPD-LDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGD 219

HSP 2 Score: 25.0238 bits (53), Expect = 1.843e-37
Identity = 18/61 (29.51%), Postives = 26/61 (42.62%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSLPPQPRNLIPRPFPHPPRLTQKPTKTQVTPRF 663
            ++VI NG+YKSV    I+QT      + S      + +  P P            QV P+F
Sbjct:  221 LEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKF 281
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.402e-37
Identity = 76/128 (59.38%), Postives = 85/128 (66.41%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  +    LDEEY+K+                           GYLKK F+G+ GPTFGTKVSNYPPCPKPDLIKGLRAHTDA GIILLFQDDKVSGL L KDG WIDVPP+ H+IVV+LGD
Sbjct:   93 RHLPESNISQMSD-LDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGD 219

HSP 2 Score: 28.1054 bits (61), Expect = 2.402e-37
Identity = 19/62 (30.65%), Postives = 29/62 (46.77%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKG-PDVPSLPPQPRNLIPRPFPHPPRLTQKPTKTQVTPRF 663
            ++VI NG+YKSV    ++QT   G   + S      + +  P P      Q   K +V P+F
Sbjct:  221 LEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKF 282
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.009e-37
Identity = 77/128 (60.16%), Postives = 85/128 (66.41%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  E P  LD+EYR+V                           GYLKK F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDA GIILLFQDDKVSGL L KD QWIDVPP+ HSIV++LGD
Sbjct:   93 RHLPVSNISEVPD-LDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGD 219

HSP 2 Score: 25.7942 bits (55), Expect = 9.009e-37
Identity = 18/61 (29.51%), Postives = 28/61 (45.90%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSLPPQPRNLIPRPFPHPPRLTQKPTKTQVTPRF 663
            ++VI NG+YKSV    I+QT      + S      + +  P P       +  K Q+ P+F
Sbjct:  221 LEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENK-QIYPKF 280
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.174e-36
Identity = 76/128 (59.38%), Postives = 86/128 (67.19%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  E P  L+EEYRK                            GYLKKVF+G+ GP FGTKVSNYPPCPKPDLIKGLRAH+DA GIILLFQDDKVSGL L KDG+W+DVPP+ HSIV++LGD
Sbjct:   93 RHLPSSNISEIPD-LEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGD 219

HSP 2 Score: 24.6386 bits (52), Expect = 1.174e-36
Identity = 20/62 (32.26%), Postives = 28/62 (45.16%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSL-PPQPRNLIPRPFPHPPRLTQKPTKTQVTPRF 663
            I+VI NG+YKSV    I+Q+      + S   P   + I    P P  L +K       P+F
Sbjct:  221 IEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFIS---PAPAVLEKKTEDAPTYPKF 279
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.992e-36
Identity = 74/128 (57.81%), Postives = 86/128 (67.19%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  E    LDEEY+KV                           GYLKKVF+G+ GP FGTKVSNYPPCPKP+LIKGLRAHTDA G+ILLFQDDKVSGL + KDG+W+DVPP+ HSIV++LGD
Sbjct:   94 RHLPVSNMSEIGD-LDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGD 220

HSP 2 Score: 27.335 bits (59), Expect = 1.992e-36
Identity = 17/61 (27.87%), Postives = 30/61 (49.18%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSLPPQPRNLIPRPFPHPPRLTQKPTKTQVTPRF 663
            ++VI NG+YKSV    I+Q       + S      + +   +P P  +  +  KT++ P+F
Sbjct:  222 LEVITNGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAV--IYPAPALVEGEQEKTKLYPKF 280
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.992e-36
Identity = 76/128 (59.38%), Postives = 83/128 (64.84%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P  +  E P  LDEEYR+V                           GYLKK F+G  GP FGTKV+NYPPCPK DLIKGLRAHTDA GIILLFQDDKVSGL L KD QWIDVPP+ HSIV++LGD
Sbjct:   93 RHLPQSNISEVPD-LDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGD 219

HSP 2 Score: 26.9498 bits (58), Expect = 1.992e-36
Identity = 16/61 (26.23%), Postives = 31/61 (50.82%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSLPPQPRNLIPRPFPHPPRLTQKPTKTQVTPRF 663
            ++VI NG+YKSV    ++QT      + S      + +   +P P  + ++  + +V P+F
Sbjct:  221 LEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAV--IYPAPALVEKEVEEKEVYPKF 279
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.044e-36
Identity = 76/128 (59.38%), Postives = 84/128 (65.62%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            RH P     E P  LD++YRKV                           GYLKK F+G+ GP FGTKVSNYPPCPKP+LIKGLRAHTDA GIILLFQDDKVSGL L KD QWIDVPP+ HSIV++LGD
Sbjct:   93 RHLPVSSISEIPD-LDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGD 219

HSP 2 Score: 25.0238 bits (53), Expect = 2.044e-36
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQT 540
            ++VI NG+YKSV    I+QT
Sbjct:  221 LEVITNGKYKSVMHRVIAQT 240

HSP 3 Score: 21.9422 bits (45), Expect = 2.044e-36
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 
Query:  542 TARARMSPASLHNPG 586
            T  ARMS AS +NPG
Sbjct:  240 TDGARMSIASFYNPG 254
[Close]
BLAST of DY260183 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.594e-36
Identity = 78/128 (60.94%), Postives = 85/128 (66.41%), Query Frame = 3 
Query:   93 RHPPPGDQQEKPPYLDEEYRKVTXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDARGIILLFQDDKVSGLPLPKDGQWIDVPPLPHSIVVHLGD 476
            +H P  +  E P  LDEEYR+V                           GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDA GIILLFQDDKVSGL L KDGQWIDVPP+ HSIVV+LGD
Sbjct:   93 KHLPISNISEVPD-LDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGD 219

HSP 2 Score: 23.483 bits (49), Expect = 2.594e-36
Identity = 19/63 (30.16%), Postives = 29/63 (46.03%), Query Frame = 1 
Query:  481 IDVIPNGQYKSVELTAISQTHRKGPDVPSLPPQPRNLIPRPFPHPPRLTQKPTK--TQVTPRF 663
            ++VI NG+YKSV    I+Q       + S      + +  P    P L +K  +   QV P+F
Sbjct:  221 LEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYP---APALVEKEAEENKQVYPKF 280
The following BLAST results are available for this feature:
BLAST of DY260183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ACCO_DIACA4.912e-3860.16Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_PRUMU6.400e-3858.591-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO3_PETHY1.843e-3761.721-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_CUCME2.402e-3759.381-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO4_PETHY9.009e-3760.161-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_MALDO1.174e-3659.381-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO3_CUCME1.992e-3657.811-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_DIOKA1.992e-3659.381-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_PEA2.044e-3659.381-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_PETHY2.594e-3660.941-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YJ14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260183 ID=DY260183; Name=DY260183; organism=Citrus clementina; type=EST; length=1105bp
CTTCCCTTTCTGGGCNACTTTGNACCAAAAAGTGCGGGGNACCCAAACCC
TCTGTCAAGGACACAGGACCGCGGAAAGCACCNGACCAAGCGCGCCACCC
CCCCCCAGGCGACCAGCAAGAGAAGCCCCCCTATCTTGACGAGGAATACA
GGAAGGTGACGAAGGAATTTGCATTGAAATTGGAGAAATTAGCAGAGGAG
CTATTGGACTTGTTATGCGAGAATCTTGGATTAGAGAAGGGGTACTTGAA
AAAGGTCTTTCATGGGGCAAACGGACCAACCTTTGGTACCAAAGTTAGCA
ACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGTCTCCGGGCTCAC
ACCGACGCCCGCGGCATCATCTTGCTCTTCCAGGATGACAAAGTCAGTGG
CCTTCCGCTTCCTAAAGATGGCCAGTGGATTGACGTGCCCCCCTTGCCCC
ACTCCATTGTTGTCCACCTCGGTGACCCTAATTGACGTGATCCCCAATGG
ACAGTACAAGAGTGTGGAGCTCACAGCGATTTCCCAAACCCACCGCAAGG
GCCCGGATGTCCCCAGCCTCCCTCCACAACCCCGGAACTTGATCCCGCGA
CCTTTCCCGCACCCCCCTCGCCTGACACAGAAGCCGACAAAGACACAAGT
GACCCCAAGATTTTGTCTTTGAGGACCCCACGACGCCTCACTGCTCCCCT
CCCGCTCCCCCCCACGAACCCAAAACTCGAGCCCTCGAACCCCGCGGAAA
CCAACCCGACAACTTGTGCCAAGTCCCCTCCTCTCTAAACACATCCCCTT
AAAGCACAACTCTCCCCATCCTGCTGAACCGCGCCGCCCCTTCCCCTTCT
ATTCATTTTACACCCGCCACTCCACCCAACCCACCTTCGTCCTCCCCATC
CCCACAACCAACTTATCAAAACTCATTCCCCCTCCTCCCAAACCCAACAA
ACCAAACACAACCAAAAACCAACTTCTCCTCCTACCCCCCCCAGTAAATT
CTACCATACACCTCGACCCTTCTCACTATACCCCCCCGCTCCACCCCCAG
CCCCGCGAGCTCATCCCAACCTACACGCCCTCATACATAAATCCTACTCA
TCCCC
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