DY260215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 360.533 bits (924), Expect = 1.265e-116 Identity = 188/209 (89.95%), Postives = 202/209 (96.65%), Query Frame = 2 Query: 2 RAPFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 RAP LII+ED+TGEALATLV+NKLRGILNVAAIKAPGFGERRKALLQDIAI+TGAEFQA DLGLL+ENT++EQLG ARKVTI KDSTTIIADAASKDE+Q+R+AQLKKEL+ETDS+YDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALV LS +VPAIK+KLEDADERLGADIVQKALVAP Sbjct: 289 RAPLLIISEDITGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTTIEQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLEDADERLGADIVQKALVAP 497 HSP 2 Score: 82.0333 bits (201), Expect = 1.265e-116 Identity = 41/70 (58.57%), Postives = 47/70 (67.14%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 PA+LIA NA EW GY+AMTD YEN+ +G+IDPAKVT+CAL NAASVAGMVLT A Sbjct: 497 PAALIAQNAGIEGEVVVEKIKNGEWEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQA 566
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 350.903 bits (899), Expect = 2.590e-114 Identity = 182/209 (87.08%), Postives = 200/209 (95.69%), Query Frame = 2 Query: 2 RAPFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 RAP LIIAEDVTGEALATLV+NKLRG+LNV A+KAPGFGERRKA+LQDIAI+TGAE+QA D+GLL+ENT+++QLG ARKVTI KDSTT+IADAASKDE+QARI+QLKKEL+ETDSVYDSEKLAERIAKL+GGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA LV LS +PAIK+KLEDADERLGADIVQKALVAP Sbjct: 248 RAPLLIIAEDVTGEALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYQALDMGLLVENTTIDQLGIARKVTISKDSTTLIADAASKDELQARISQLKKELSETDSVYDSEKLAERIAKLAGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDADERLGADIVQKALVAP 456 HSP 2 Score: 83.9593 bits (206), Expect = 2.590e-114 Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 PA+LIA NA SEW GY+AMTD YEN+ AG+IDPAKVT+CAL NAASVAGMVLT A Sbjct: 456 PAALIAQNAGIEGEVVVEKIMFSEWEIGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQA 525
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 340.887 bits (873), Expect = 5.806e-111 Identity = 178/209 (85.17%), Postives = 195/209 (93.30%), Query Frame = 2 Query: 2 RAPFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 RAP LIIAEDVTGEALATLV+NKLRG+LNV A+KAPGFGERRKA+LQDIAI+TGAE+ A D+ LL+EN +++QLG ARKVTI KDSTT+IADAASKDE+QARIAQLKKEL ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALV LS +PAIK+ EDADERLGADIVQKAL++P Sbjct: 288 RAPLLIIAEDVTGEALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYLAMDMSLLVENATIDQLGIARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDADERLGADIVQKALLSP 496 HSP 2 Score: 82.8037 bits (203), Expect = 5.806e-111 Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 PA+LIA NA S+W GY+AMTD YEN+ AG+IDPAKVT+CAL NAASVAGMVLT A Sbjct: 496 PAALIAQNAGVEGEVVVEKIMFSDWENGYNAMTDTYENLFEAGVIDPAKVTRCALQNAASVAGMVLTTQA 565
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 1.684e-110 Identity = 189/209 (90.43%), Postives = 199/209 (95.22%), Query Frame = 2 Query: 2 RAPFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 RAP LIIAEDVTGEALATLV+NK+RGILNVAAIKAPGFGERRKALLQDIAI+TGAEFQA DLGLL+ENTSVEQLG ARKVTI KDSTT+IADAASKDE+QARIAQLK+ELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALV LS VPAI + +DADERLGADI+QKALVAP Sbjct: 231 RAPLLIIAEDVTGEALATLVVNKMRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLGIARKVTITKDSTTLIADAASKDELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPAINGEDKDADERLGADILQKALVAP 439 HSP 2 Score: 68.9366 bits (167), Expect = 1.684e-110 Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPN 797 PASLIA NA A EW GY+AMTD+YEN+ AG+IDPAKVT+CAL N Sbjct: 439 PASLIAQNAGIEGEVVVEKVKAREWEIGYNAMTDKYENLVEAGVIDPAKVTRCALQN 495
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 1.845e-109 Identity = 172/209 (82.30%), Postives = 193/209 (92.34%), Query Frame = 2 Query: 2 RAPFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 R P I+AED+TGEALATLV+NKLRGI+NVAAIKAP FGERRKA+LQDIAIVTGAE+ A DLGLL+EN +V+QLGTARK+TI + +TT+IADAASKDEIQAR+AQLKKEL+ETDS+YDSEKLAERIAKLSGGVAVIKVGA TETELEDR+LRIEDAKNATFAAIEEGIVPGGGAA V LS +VPAIK+ +ED DERLGADI+QKAL AP Sbjct: 244 RCPLFIVAEDITGEALATLVVNKLRGIINVAAIKAPSFGERRKAVLQDIAIVTGAEYLAKDLGLLVENATVDQLGTARKITIHQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGATTETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTYVPAIKETIEDHDERLGADIIQKALQAP 452 HSP 2 Score: 84.3445 bits (207), Expect = 1.845e-109 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 PASLIA+NA SEW GY+AMTD+YEN+ +G+IDPAKVT+CAL NAASV+GMVLT A Sbjct: 452 PASLIANNAGVEGEVVIEKIKESEWEMGYNAMTDKYENLIESGVIDPAKVTRCALQNAASVSGMVLTTQA 521
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 1.711e-104 Identity = 173/208 (83.17%), Postives = 188/208 (90.38%), Query Frame = 2 Query: 2 RAPFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVA 625 RAP LIIAEDVTGEALATLV+NKLRG+LNV A+KAPGFGERRKA+LQDIAI+T A D+GLL+ENT+++QLG ARKVTI KDSTT+IADAASK E+QARI+QLKKE ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA LV LS +PAIK+ EDAD RLGADIVQKALVA Sbjct: 287 RAPLLIIAEDVTGEALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTEPS-TALDMGLLVENTTIDQLGIARKVTISKDSTTLIADAASKAELQARISQLKKESFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDADVRLGADIVQKALVA 493 HSP 2 Score: 80.8777 bits (198), Expect = 1.711e-104 Identity = 42/68 (61.76%), Postives = 46/68 (67.65%), Query Frame = 3 Query: 633 SLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 SLIA NA SEW GY+AMTD YEN+ AG+IDPAKVT+CAL NAASVAGMVLT A Sbjct: 495 SLIAQNAGIEGEVVVEKIMFSEWELGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQA 562
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 3.851e-98 Identity = 169/209 (80.86%), Postives = 189/209 (90.43%), Query Frame = 2 Query: 5 APFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAPC 631 AP LIIAEDV+GEALATLV+NKLRG+LNV AIKAPGFGERRK+LLQDIAIVTGAEF A DLG+ +E VEQLG ARKVT+ ++TT+IADAASKDEI+ RIAQLKKELAETDSVYD+EKL+ERIAKLSGGVAVIKVGAATE ELEDRKLRIEDAKNATFAA+EEGIVPGGGAAL+ LS+ VPA K+ L DA+E+LGADIV K+L APC Sbjct: 278 APLLIIAEDVSGEALATLVVNKLRGVLNVCAIKAPGFGERRKSLLQDIAIVTGAEFIAKDLGMKVEQAVVEQLGVARKVTVANNTTTLIADAASKDEIEMRIAQLKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATEAELEDRKLRIEDAKNATFAAVEEGIVPGGGAALLHLSELVPAFKETLTDAEEKLGADIVMKSLRAPC 486 HSP 2 Score: 57.3806 bits (137), Expect = 3.851e-98 Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 P LIA NA + GY+AM D+ EN+ AG+IDPAKVT+ L N+ S+AG++LT A Sbjct: 485 PCRLIADNAGVEGEVIVQRLLGKPFEVGYNAMIDKVENLLDAGVIDPAKVTRNGLLNSVSIAGIMLTTQA 554
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 1.619e-81 Identity = 139/207 (67.15%), Postives = 171/207 (82.61%), Query Frame = 2 Query: 8 PFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 P LIIAEDV G+ALATLV+NK RG+L+VAAIKAPGFGERRKALLQDIAI+T + + ++GL ++ S+E LGTA+K+TI KD+TTI+A +K EIQ RIAQ++++L ETDS YDSEKL ERIAKL+GG+AVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L+ L+ V IK K D +E++GADIV++AL AP Sbjct: 244 PLLIIAEDVEGDALATLVVNKARGVLSVAAIKAPGFGERRKALLQDIAILTDGQLISEEIGLSLDTASLEALGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIK-KNFDEEEKIGADIVKRALEAP 449 HSP 2 Score: 62.3882 bits (150), Expect = 1.619e-81 Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 P IA NA S++ TGY+A T ++E++ +AGIIDPAKV + AL NAAS+AG+VLT A Sbjct: 449 PLRQIADNAGVEGSVIVSRVKDSDFNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEA 518
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 7.973e-81 Identity = 139/207 (67.15%), Postives = 171/207 (82.61%), Query Frame = 2 Query: 8 PFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 P LIIAEDV G+ALATLV+NK RG+L+VAAIKAPGFGERRKALLQDIAI+T + + ++GL ++ S+E LGTA+K+TI KD+TTI+A +K EIQ RIAQ++++L ETDS YDSEKL ERIAKL+GG+AVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L+ L+ V IK K D +E++GADIV++AL AP Sbjct: 244 PLLIIAEDVEGDALATLVVNKARGVLSVAAIKAPGFGERRKALLQDIAILTDGQLISEEIGLSLDTASLEALGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIK-KNFDEEEKIGADIVKRALEAP 449 HSP 2 Score: 60.077 bits (144), Expect = 7.973e-81 Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPA 836 P IA NA S++ GY+A T ++E++ +AGIIDPAKV + AL NAAS+AG+VLT A Sbjct: 449 PLRQIADNAGAEGSVIVSRVKDSDFNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEA 518
BLAST of DY260215 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 7.974e-81 Identity = 133/207 (64.25%), Postives = 171/207 (82.61%), Query Frame = 2 Query: 8 PFLIIAEDVTGEALATLVLNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVPLSDHVPAIKDKLEDADERLGADIVQKALVAP 628 P LIIAED+ GEALATLV+NKLRG+LNV AIKAPGFGERR+A+LQDIA++TG + + D+GL ++ +E LGTARKVTI KD+TTI+++AA+ ++ R+ QL+++L ETDS YD EKL ERIAKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L+ L+ + ++K +L+D +E++GAD+V AL AP Sbjct: 244 PLLIIAEDLEGEALATLVVNKLRGVLNVVAIKAPGFGERRQAMLQDIAVLTGGQVISEDVGLTLDKVDLEMLGTARKVTISKDNTTIVSEAANAGDVGKRVEQLRRQLDETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGTTLIHLTKTIESVKAQLKD-EEKVGADLVGIALEAP 449 HSP 2 Score: 63.929 bits (154), Expect = 7.974e-81 Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 627 PASLIAHNAXXXXXXXXXXXXASEWTTGYHAMTDQYENMPSAGIIDPAKVTKCALPNAASVAGMVLTPPAYCPGKSQ 857 P + IA NA ++++ GY+AMTD YE+M +AG++DPAKV + L NA S+AGMVLT A K + Sbjct: 449 PLTQIADNAGKEGAVVVEKVRDADFSYGYNAMTDTYEDMIAAGVVDPAKVVRSGLQNAGSIAGMVLTTEALVVDKPE 525 The following BLAST results are available for this feature:
BLAST of DY260215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260215 ID=DY260215; Name=DY260215; organism=Citrus clementina; type=EST; length=1017bpback to top |