DY260259
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 5.915e-79 Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI NKPYPKSRFCRGVPDP+IRIYDVGMKKKGVDEFPFCV LVSWEKENVSSEALEAARIACNKYM +FAGKDAF Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAF 85 HSP 2 Score: 146.747 bits (369), Expect = 5.915e-79 Identity = 84/136 (61.76%), Postives = 92/136 (67.65%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAFGKP G CARVAIGQVLLSV CKD+NS AQEAL AKF+FPG K +K GF ++ + + E P G L LA+ PGRAF Sbjct: 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKI-NRADYPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.233e-78 Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI NKPYPKSRFCRGVPDP+IRIYDVGMK+KGVDEFPFCV LVSWEKENVSSEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAF 85 HSP 2 Score: 149.058 bits (375), Expect = 2.233e-78 Identity = 85/136 (62.50%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAFGKP G CARVAIGQVLLSV CKD NS AQEAL AKF+FPG K +K GF + + + E P G L PLA+ PGRAF Sbjct: 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYK-SENRIVPDGVNAKLLGNHGPLAARQPGRAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.954e-78 Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI NKPYPKSR+CRGVPDP+IRIYDVGMKKKGVDEFPFCV LVSWEKENVSSEALEAARIACNKYM ++AGKDAF Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAF 85 HSP 2 Score: 145.976 bits (367), Expect = 4.954e-78 Identity = 83/136 (61.03%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAFGKP GTCARV+IGQVLLSV CKD NS AQEAL AKF+FP K +K GF + + + Q P G L PLA+ PG+AF Sbjct: 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYIKWKSQN-RILPDGVNAKLLGCHGPLANRQPGKAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.149e-77 Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI KPYPKSR+CRGVPDP+IRIYDVGMK+KGVDEFPFCV LVSWEKENVSSEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAF 85 HSP 2 Score: 148.288 bits (373), Expect = 4.149e-77 Identity = 83/136 (61.03%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLR+RVHPFHVL INKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSV CKD++ AQEAL AKF+FPG K +K GF + +++ QE P G FL PLA+ PG AF Sbjct: 81 GKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADFTKLR-QEKRVVPDGVNAKFLSCHGPLANRQPGSAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 1.201e-76 Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI KPYPKSR+CRGVPDP+IRIYDVGMK+KGVDEFP+CV LVSWEKENVSSEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAF 85 HSP 2 Score: 147.902 bits (372), Expect = 1.201e-76 Identity = 83/136 (61.03%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLR+RVHPFHVL INKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSV CKD++ AQEAL AKF+FPG K +K GF + +++ QE P G FL PLA+ PG AF Sbjct: 81 GKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLR-QEKRIVPDGVNAKFLSCHGPLANRQPGSAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.664e-76 Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI KPYPKSR+CRGVPDP+IRIYDVGMK+KGVDEFPFCV LVSWEKENVSSEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAF 85 HSP 2 Score: 145.591 bits (366), Expect = 2.664e-76 Identity = 81/136 (59.56%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLR+RVHPFHVL INKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSV CKD++ + AQEAL AKF+FPG K +K GF + +++ + P G FL PLA+ PG AF Sbjct: 81 GKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAEYTKLRAMK-RIVPDGVNAKFLSNHGPLANRQPGSAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.311e-75 Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI NKPYPKSR+CRGVPDP+IRIYDVGMKKKGVDEFP+CV LVSWEKENVSSEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAF 85 HSP 2 Score: 141.354 bits (355), Expect = 1.311e-75 Identity = 80/136 (58.82%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAFGKP GTCARV IGQVLLSV CK+SN+ A+EAL AKF+FPG K +K GF + + +++ + + N Q L LA PG+AF Sbjct: 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQ-LLGSHGRLAKRAPGKAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 1.311e-75 Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI NKPYPKSR+CRGVPDP+IRIYDVGMKKKGVDEFP+CV LVSWEKENVSSEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAF 85 HSP 2 Score: 141.354 bits (355), Expect = 1.311e-75 Identity = 80/136 (58.82%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAFGKP GTCARV IGQVLLSV CK+SN+ A+EAL AKF+FPG K +K GF + + +++ + + N Q L LA PG+AF Sbjct: 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQ-LLGSHGRLAKRAPGKAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.469e-73 Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI NKPYPKSR+CRGVPDP+IRIYDVGMKKKGVDEF CV LVSWEKENV+SEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAF 85 HSP 2 Score: 138.658 bits (348), Expect = 3.469e-73 Identity = 79/136 (58.09%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAFGKP GTCARV IGQVLLSV CK +N++ A EAL AKF+FPG K +K GF + ++ E P G L L++ PG+AF Sbjct: 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLK-SEGRIMPDGVNAKLLGCHGRLSARAPGKAF 215
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 3.469e-73 Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +GRRPARCYRQI NKPYPKSR+CRGVPDP+IRIYDVGMKKKGVDEF CV LVSWEKENV+SEALEAARIACNKYM + AGKDAF Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAF 85 HSP 2 Score: 138.658 bits (348), Expect = 3.469e-73 Identity = 79/136 (58.09%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPKNPCPQKVGFPQV*PQ*LFEVQVQEPYCAPRGNGQAFLDVPDPLASPPPGRAF 699 GK FHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAFGKP GTCARV IGQVLLSV CK +N++ A EAL AKF+FPG K +K GF + ++ E P G L L++ PG+AF Sbjct: 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLK-SEGRIMPDGVNAKLLGCHGRLSARAPGKAF 215 The following BLAST results are available for this feature:
BLAST of DY260259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260259 ID=DY260259; Name=DY260259; organism=Citrus clementina; type=EST; length=1115bpback to top |