DY260268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260268 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.649e-44 Identity = 105/190 (55.26%), Postives = 129/190 (67.89%), Query Frame = 2 Query: 95 SVLPARVTGIR-KSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGNTLV 607 S++ +T I +S V QF+++ Y+P TL+RNVSL VR MA+ E ++ ST P + P++STKFSD+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ + QLS GGVAWFLGT P F+GVSVESKS M+SDAE WNGR AM+GLVALA TEFVKG +LV Sbjct: 8 SIMSNSMTNISSRSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
BLAST of DY260268 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 9.067e-35 Identity = 87/200 (43.50%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 47 STKMAASLPTQSMLGSSVLPARVTGIRKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTKFS-DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGNTLV 607 S+ A++P S G S +T + ++ LP ++RN +VR M ++ +QQK Q T P ++TK + D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL T P+++G+S E+K++GF SDAE+WNGRFAM+GLVALA TE+VKG L+ Sbjct: 3 SSTCYATIPAMSCRGQST----ITRFGPNNLFLGKQSYELP-LMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197
BLAST of DY260268 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.942e-30 Identity = 78/181 (43.09%), Postives = 100/181 (55.25%), Query Frame = 2 Query: 56 MAASLPTQSMLGSSVLPARVTGIRKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKG 595 MA + S G++V+P +S F + + LP +L R + Q + S PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++AELWNGRFAM+GLVALA TE + G Sbjct: 1 MATMMSMSSFAGAAVVP-------RSSASSFGA-RSLP-------ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITG 166
BLAST of DY260268 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.942e-30 Identity = 77/185 (41.62%), Postives = 98/185 (52.97%), Query Frame = 2 Query: 56 MAASLPTQSMLGSSVLPARVTGIRKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGNTLV 607 MA + S G++VLP S + LP +L R + Q + + PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++AELWNGRFAM+GLVALA TE + G + Sbjct: 1 MATMMAMSSFAGAAVLPR-------------GSARSLP-------ALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITGTPFI 165
BLAST of DY260268 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.268e-28 Identity = 70/129 (54.26%), Postives = 84/129 (65.12%), Query Frame = 2 Query: 242 TQPPKLPRISTKFS-----DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGNTLV 607 T P P+ TK + D AFSGPAPERINGRLAM+GFVAAL+VE ++G + Q+ G+AWFL T PL +G SVESKS G ++DAELWNGRFAM+GLVALA TEF+ G V Sbjct: 101 TTIPAAPKPVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
BLAST of DY260268 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.173e-14 Identity = 61/162 (37.65%), Postives = 76/162 (46.91%), Query Frame = 2 Query: 149 SSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPR--------ISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSD--GFMTSDAELWNGRFAMMGLVALAVTEFVKGNTL 604 +S+ P L R + C + + ST PP P + ++V FSG APE INGRLAM+GFVAAL ELS G+ V QL D L T P F K D G T DAE+ NGRFAM+G A+ V E ++G L Sbjct: 16 ASINVRPAPLLRTAAPKRVCKHIVRAENNPSTPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQGIAL 171 The following BLAST results are available for this feature:
BLAST of DY260268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260268 ID=DY260268; Name=DY260268; organism=Citrus clementina; type=EST; length=1034bpback to top |