DY260377

Overview
NameDY260377
Unique NameDY260377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1115
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260377_ssr228 microsatellite DY260377_ssr228:228..239. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY260377 vs. ExPASy Swiss-Prot
Match: UFOG5_MANES (Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 6.130e-48
Identity = 111/281 (39.50%), Postives = 164/281 (58.36%), Query Frame = 1
Query:   52 MQSTKL--KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDXXXXXXXXXXXXXXXXXXXTLPLASISSLVNPDASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDEHFNLEK-PMELPGCMPVRFQDSLELFLHPNEPIFDFISSIRMKMSPSEGILVNTWEDPEPQNTWFLKRRNLVGPWCKTPVYPNWTHLGNPGSCFPL*TKSPPSKAQSSSRDWAKPPP 885
            M ST L  KPHI LL+SPG+GHLIPV+ELGKR+V   +  VT+F+V S                       LP  +IS L++P+A++  ++ VLM +  PA R+A+SA+KFRP A+IVD FGTE+++VA E G+ KY++IASNAWFLA  I+ P +DK++  +  F L+K PM++PGC PVR ++ ++  L      +     + +++  ++GIL+NTWE  EP     L+    +G   K PV+P    +G      PL  ++ P  +     DW    P
Sbjct:    1 MGSTDLNSKPHIVLLSSPGLGHLIPVLELGKRIVTLCNFDVTIFMVGSDTSAAEPQVLRSAMTPKLCEIIQLPPPNISCLIDPEATVCTRLFVLMREIRPAFRAAVSALKFRPAAIIVDLFGTESLEVAKELGIAKYVYIASNAWFLALTIYVPILDKEV--EGEFVLQKEPMKIPGCRPVRTEEVVDPMLDRTNQQYSEYFRLGIEIPTADGILMNTWEALEPTTFGALRDVKFLGRVAKVPVFP----IG------PLRRQAGPCGSNCELLDWLDQQP 269          
BLAST of DY260377 vs. ExPASy Swiss-Prot
Match: HQGT_RAUSE (Hydroquinone glucosyltransferase OS=Rauvolfia serpentina GN=AS PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.735e-26
Identity = 76/238 (31.93%), Postives = 123/238 (51.68%), Query Frame = 1
Query:   73 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDXXXXXXXXXXXXXXXXXXXTLPLASISSLVNPDASLGEKILVLMHKSLPALRSAISAM--KFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIRMKMSPSEGILVNTWEDPEPQNTWFLKRRNLVGPWCKTPVYP 780
            PHI ++ +PGMGHLIP+VE  KRLV  H+  VT F++ +                       LP  S   L   D  +  +I + + +SLP +R A+  +    +  AL+VD FGT+A DVA EF +  Y+F  + A  L+ F H P +D ++++ E+ ++ +P+++PGC+P+  +D L+         +  +     +   +EGI+VNT+ D EP     L+  +   P    PVYP
Sbjct:    5 PHIAMVPTPGMGHLIPLVEFAKRLVLRHNFGVT-FIIPTDGPLPKAQKSFLDALPAGVNYVLLPPVSFDDL-PADVRIETRICLTITRSLPFVRDAVKTLLATTKLAALVVDLFGTDAFDVAIEFKVSPYIFYPTTAMCLSLFFHLPKLD-QMVSCEYRDVPEPLQIPGCIPIHGKDFLDPAQDRKNDAYKCLLHQAKRYRLAEGIMVNTFNDLEPGPLKALQEEDQGKP----PVYP 235          
BLAST of DY260377 vs. ExPASy Swiss-Prot
Match: HQGT_ARATH (Probable hydroquinone glucosyltransferase OS=Arabidopsis thaliana GN=At4g01070 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.960e-26
Identity = 81/239 (33.89%), Postives = 121/239 (50.63%), Query Frame = 1
Query:   73 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDXXXXXXXXXXXXXXXXXXXTLPLASISSLVNPDASLGEKILVLMHKSLPALRSAISAMKFR---PTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIRMKMSPSEGILVNTWEDPEPQNTWFLKRRNLVGPWCKTPVYP 780
            PH+ ++ SPGMGHLIP+VE  KRLV  H + VT FV+A                        LP   ++ L +    +  +I + + +S P LR    +       PTAL+VD FGT+A DVA EF +  Y+F  + A  L+ F+H P +D + ++ E   L +P+ LPGC+PV  +D L+      +  + ++     +   +EGILVNT+ + EP     L+   L  P    PVYP
Sbjct:    7 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVT-FVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDL-SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLD-ETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKP----PVYP 238          
The following BLAST results are available for this feature:
BLAST of DY260377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
UFOG5_MANES6.130e-4839.50Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot... [more]
HQGT_RAUSE1.735e-2631.93Hydroquinone glucosyltransferase OS=Rauvolfia serp... [more]
HQGT_ARATH2.960e-2633.89Probable hydroquinone glucosyltransferase OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP12YE22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260377 ID=DY260377; Name=DY260377; organism=Citrus clementina; type=EST; length=1115bp
TTGGCTTTATAATTTCCTCGCATCCCTCTCCAAAAGTTCCAATCCATAGG
CATGCAAAGCACAAAATTAAAACCTCACATATGCCTACTTGCTAGCCCTG
GTATGGGGCACCTTATCCCCGTCGTTGAGCTAGGCAAACGGCTAGTCGCT
CACCATGATGTCCAAGTCACTGTGTTTGTTGTGGCAAGTCATGATGATGC
CTCAAACTCAAATGTTCATGCCGTCCCTAATAATAATAATCTCTTTAACG
CTGTCACACTCCCCTTAGCGAGCATATCCAGCCTAGTAAACCCGGATGCT
TCATTGGGAGAGAAAATACTTGTGTTGATGCACAAGTCCTTACCGGCACT
CCGATCAGCCATCTCTGCAATGAAGTTCCGTCCAACGGCTTTGATTGTTG
ACTTTTTTGGCACTGAGGCCATGGATGTTGCGGACGAGTTCGGGTTGCTC
AAGTACATGTTCATTGCTTCTAATGCATGGTTTCTTGCTTGCTTCATACA
TGCACCTGCAATTGATAAAAAGCTTTTAACAGATGAGCACTTCAACCTGG
AAAAACCAATGGAATTACCTGGGTGTATGCCGGTTCGATTCCAGGACTCC
TTGGAATTGTTTCTACACCCAAACGAGCCGATATTCGATTTCATTTCCAG
TATAAGGATGAAGATGTCACCGTCCGAAGGAATCCTGGTCAACACGTGGG
AAGATCCGGAACCCCAAAACACCTGGTTCCTTAAAAGACGAAACCTTGTT
GGGCCGTGGTGTAAAACCCCTGTTTACCCCAATTGGACCCACTTGGGAAA
CCCCGGAAGTTGCTTCCCCCTTTAAACAAAAAGTCCCCCCTCGAAAGCCC
AGTCCTCCTCCCGGGATTGGGCCAAACCACCCCCCAATCCAACCGGGGGA
TTAATTATTCCTTTGGAATTGGTGGGACCCTTTTACCCACAAAAAAGGAC
GGAGACCTGAAGGGGACTTTGAAAAACTCCACCCGCAAAAGGTCTTTTTA
GGGGGGGAACCCCCCTCCCGTTGAAAAAAGACACACCCCGCGCTCCTACA
ATTAAACCCTCTACGACAAAAAAACTCTGTCGCCGCCGAAAAATCAAAAA
AAATAGCACCCGCCA
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