DY260402

Overview
NameDY260402
Unique NameDY260402
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1147
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260402_ssr33 microsatellite DY260402_ssr33:33..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.874e-42
Identity = 89/261 (34.10%), Postives = 138/261 (52.87%), Query Frame = 1
Query:   82 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVQSSISGGDQDLVHNNKRTK 852
            G+ +H   +G+GPAV   HGFPE W+SWR Q+  L+  G+R +A D++GYG++ APP +  Y+                  Q   +GHDWG ++ W   LF P+RV+A+ +++ PF P NP V P+   +A    DY +  FQEPG  E E  Q +  R  K F        L   +   L  L    P+  +L   ++EED+ +Y  +F + GF GP+N+YR  + NW+     +G +I + + +   + DLV + K +K
Sbjct:  247 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQL-YFQEPGVAEAELEQ-NLDRTFKNFFRAHDETFLTTNRVRELGGLFVGTPEEPSLSRLVTEEDIQFYVQQFKKSGFRGPLNWYRNMERNWQWGCKGSGRKILIPALMVTAENDLVLHPKMSK 505          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.514e-41
Identity = 86/253 (33.99%), Postives = 133/253 (52.57%), Query Frame = 1
Query:   85 INMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVQSSISGGDQDLV 831
            + +H   +G+GPAV   HGFPE WYSWR Q+  L+  GYR +A D++GYG++ APP +  Y                   Q   +GHDWG ++ WY  LF P+RV+A+ +++ PF P NP + PL + +A    DY +  FQEPG  E E  Q + +R  K          L + K      L    P+  +L   ++EE++ +Y  +F + GF GP+N+YR  + NW+      G +I + + +   ++D V
Sbjct:  248 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQL-YFQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFV 498          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.046e-38
Identity = 83/262 (31.68%), Postives = 136/262 (51.91%), Query Frame = 1
Query:   82 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKP-LCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVQSSISGGDQDLVHNNKRTK 852
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP +  Y                   Q   +GHDW  ++ W   LF P+RV+A+ +++ P  P NP V P+   R++   +Y +  FQEPG  E E  + + +R  K F         L + K T +  +    P+   +    +EE++ YY  +F + GF GP+N+YR  + NW+      G +I V + +   ++D+V   + +K
Sbjct:  245 GIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQL-YFQEPGVAEAELEK-NMSRTFKSFFRTSDDMGLLTVNKATEMGGILVGTPEDPKVSKITTEEEIEYYIQQFKKSGFRGPLNWYRNTERNWKWSCKALGRKILVPALMVTAEKDIVLRPEMSK 504          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.732e-37
Identity = 82/262 (31.30%), Postives = 137/262 (52.29%), Query Frame = 1
Query:   82 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKP-LCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVQSSISGGDQDLVHNNKRTK 852
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP +  Y                   Q   +GHDW  ++ W   LF P+RV+A+ +++ PF P +P V P+   R++   +Y +  FQEPG  E E  + + +R  K F         + + K T +  +    P+   L    +EE++ +Y  +F + GF GP+N+YR  + NW+      G +I V + +   ++D+V   + +K
Sbjct:  245 GIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQL-YFQEPGVAEAELEK-NMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNTERNWKWSCKGLGRKILVPALMVTAEKDIVLRPEMSK 504          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.796e-26
Identity = 75/234 (32.05%), Postives = 108/234 (46.15%), Query Frame = 1
Query:   46 MEKIEHTTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKG-FTGPVNYYR 738
            M+ ++   V TNGI +HVA+ G   GP ++ +HGFPE WY W+NQ+  L   GYR IAPD RGY  +D P  + SY                   +  ++GHDWG  +AW+    RP+ ++ L+ +++P P     V PL  +   +    YI  FQ P   E    + D   L                K  GLS        P+  + EDV+ Y   + Q G  T  +N+YR
Sbjct:    1 MDGVKCQFVNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPL--YPPQWLKSSYIAYFQLPDIPEASLRENDYDTL---------------DKAIGLSD------RPALFTSEDVSRYKEAWKQPGALTAMLNWYR 211          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.810e-22
Identity = 76/226 (33.63%), Postives = 111/226 (49.12%), Query Frame = 1
Query:   76 TNGINMHVASIG--TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS-VPFPP-RNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQK-GFTGPVNYYR 738
            ++G+ +H  S G   GP +LF+HGFPE W+SWR QL    SR +  +A DLRGYG +DAP  V  YT                  +  LV HDWGAL+AW+F ++ P  V+ +V +S  P    ++ ++  ++ F       +Y+  FQ P   E+  +  D           +I K     + TG+  L  PS L ++L           F+Q  G TGP+NYYR
Sbjct:   82 SSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSR-FHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAPMSVYQDYSLHHISQFFR----SHYMFLFQLPWLPEKLLSMSD----------FQILKTTLTHRKTGIPCL-TPSELEAFL---------YNFSQPGGLTGPLNYYR 282          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.062e-21
Identity = 74/236 (31.36%), Postives = 108/236 (45.76%), Query Frame = 1
Query:   61 HTTVATNGINMHVASIGTG--PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP-------RNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKG-FTGPVNYYR 738
            +  +  +G+  H  + G    P +L +HGFPE WYSWR+QL    S  YR +A DLRGYG++DAP    SY                   +  L+GHDWG +IAW   +  P+ +  L+ ++ P P        R+PA      FR+ +   YY   FQ P   E  F+  D           ++ K L   + TG+            L+ ED+  Y   F+Q G  +GP+N+YR
Sbjct:   71 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSE-YRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPA----QLFRSSF---YYF--FQIPRFPEFMFSIND----------FKVLKHLFTSQSTGI------GRKGRQLTTEDLEAYVYVFSQPGALSGPINHYR 280          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 5.597e-20
Identity = 71/229 (31.00%), Postives = 100/229 (43.67%), Query Frame = 1
Query:   61 HTTVATNGINMHVASIGTG--PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKG-FTGPVNYYR 738
            +  +  +G+  H  + G    P +L +HGFPE WYSWR QL    S  YR +A DLRGYG+TDAP    +Y                   +  L+GHDWG +IAW   +  P+ V  L+ ++ P P  N     +    A      Y   FQ P   E  F+  D           ++ K L     TG+            L+ ED+  Y   F+Q G  +GP+N+YR
Sbjct:   73 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSE-YRVVALDLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFPHP--NVFTEYILRHPAQLLKSSYYYFFQIPWFPEFMFSIND----------FKVLKHLFTSHSTGI------GRKGCQLTTEDLEAYIYVFSQPGALSGPINHYR 282          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 2.127e-19
Identity = 71/226 (31.42%), Postives = 104/226 (46.02%), Query Frame = 1
Query:   70 VATNGINMHVASIG--TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKG-FTGPVNYYR 738
            V ++G+ +H  S G   GP +LF+HGFPE W+SWR QL    S  +  +A D+RGY  +DAP  V  YT                  +  LV HDWGA +AW F ++ P  V+ +V  + P P        +++   ++  +Y    FQ P   E+  +  D           +I K     +  G+  L  PS L ++L           F+Q G  TGP+NYYR
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQLREFQSH-FHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMVVANGP-PMSVIQEYSIHHIGQIFRSNYMFL-FQLPWLPEKLLSMSD----------FQILKDTFTHRKNGIPGL-TPSELEAFLYH---------FSQPGCLTGPINYYR 289          
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.239e-18
Identity = 72/229 (31.44%), Postives = 100/229 (43.67%), Query Frame = 1
Query:   79 NGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSA------LPSWLSEEDVNYYASKFNQKG-FTGPVNYYR 738
            +GI  H  + G    P +L +HGFPE WYSWR QL   S+ GYR +A DLRG+G +DAP  +  Y                   +  LVGHDWG  +AW F +   D V  L+ M+ P P                  DY +             +Q+ ++R +  F    IP+ L   +D      P   A      +   LS+E+V  +    +QKG  T P+NYYR
Sbjct:   83 SGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFSN-GYRTVAIDLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNAPHPSA--------------FHDYVL----------SHPSQLFSSRYVFLFQLPLIPEILLSLRDFEHIKKPLTDATHGIQNVECKLSKEEVEAFVYYPSQKGALTPPLNYYR 286          
The following BLAST results are available for this feature:
BLAST of DY260402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HYES_PIG8.874e-4234.10Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_HUMAN1.514e-4133.99Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_RAT2.046e-3831.68Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE1.732e-3731.30Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
YFHM_BACSU1.796e-2632.05AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX3_HUMAN7.810e-2233.63Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]
EPHX4_MOUSE5.062e-2131.36Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN5.597e-2031.00Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_MOUSE2.127e-1931.42Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]
EPHX3_XENTR5.239e-1831.44Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YG04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260402 ID=DY260402; Name=DY260402; organism=Citrus clementina; type=EST; length=1147bp
ACCTTCAGATTTCATAGTTGCACCAAAAGGAAAAACAAACAAACAATGGA
GAAAATAGAGCACACAACAGTAGCCACTAACGGCATAAACATGCACGTGG
CATCAATAGGGACAGGCCCAGCAGTTCTCTTCATTCACGGCTTCCCTGAA
CTCTGGTATTCCTGGCGCAACCAGCTCCTCTATCTCTCTTCCCGCGGCTA
CCGTGCCATTGCCCCAGACCTTCGTGGATACGGCGACACCGACGCCCCAC
CCTCGGTCACGTCGTACACGGCACTCCATCTTGTCGGTGACCTCATCGGC
CTCCTTGATAAATTGGGTATCCATCAAGTTTTCCTAGTGGGTCATGACTG
GGGTGCTTTGATTGCTTGGTATTTTTGTTTGTTTAGGCCGGACAGAGTCA
AGGCCTTAGTCAACATGAGCGTCCCCTTTCCTCCCAGAAACCCGGCTGTG
AGACCTCTTAATAACTTCAGGGCTGTCTATGGTGATGATTATTATATCTG
CAGATTTCAGGAACCTGGAGAGATTGAAGAAGAGTTTGCTCAGATTGATA
CTGCAAGACTTATGAAGAAATTTCTGTGTTTGCGCATTCCAAAACCACTT
TGTATACCCAAAGATACAGGACTCAGTACTCTACCGGATCCTTCAGCGTT
GCCCTCTTGGCTGTCAGAAGAAGATGTCAATTATTATGCCTCCAAATTTA
ACCAGAAAGGCTTCACTGGACCAGTGAATTATTATCGATGTTGGGATCTA
AATTGGGAGCTGATGGCGCCATGGACTGGGGTACAAATCAAAGTACAATC
CAGTATATCCGGGGGTGACCAGGATCTTGTCCATAACAACAAAAGGACAA
AAGGAAAAAACCCCATGGTGGGCTCCAAAAATATGACCATATCCGCCGGA
GTAATTGTCCAGGAAGGGGAACCCCCCTTTACCAACCAAAAAAGGCCAAA
AAATTGGGGCCCACCCCCATAATTTCCCCCAAAATTTCCAAGGGAGCCTT
GGCCTTTTCCCCCCCCCCCCCCGCCCCGCCCCCCCCAAAAAAATTACCAT
CCAAAAATTTCCTTAATTCCCCCCCCACCCACCCCCCCCGGCCCCCCCCC
CCCCCCAAGTATTCTGGGATTTTTTTCCTTTTTCCCCCCCAAAAAAA
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