DY260422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 2.194e-38 Identity = 93/192 (48.44%), Postives = 126/192 (65.62%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIANSPMGKVWT 767 D R+G MA+DA+V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + + D KT + EL++ GM LDRGY SPYFITN KT++C L DP I+I EKK+S+ + E+ R+ +LI++ED+E+D LA+ +LN + K C IK PGFGE+RKA L D+A G+V T Sbjct: 145 DLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFN-ELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSINSIVKVLELALKRQ---RPLLIVSEDVESDALATLILNKLRAGIKVCAIKAPGFGENRKANLQDLAALTGGEVIT 332
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.422e-37 Identity = 86/183 (46.99%), Postives = 122/183 (66.67%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIA 740 D R+G ++A+D +V NL S A+ I++ E+IA GT +ANGDR IGELIAKA E + + D KT + EL++ GM +DRGY+SPYFITN KT++C L DP I+I EKK+SN + + ++ + +LI+AED+E+D LA+ +LN + K C +K PGFGE+RKA L D+A Sbjct: 146 DLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISN---INAMVKVLELALKKQRPLLIVAEDVESDALATLILNKLRANIKVCAVKAPGFGENRKANLHDLA 324
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.857e-37 Identity = 88/192 (45.83%), Postives = 127/192 (66.15%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIANSPMGKVWT 767 D R+G MA+D++V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++D KT + EL++ GM LDRGY+SPYFITN K ++C L DP I+I EKK+S+ + + ++ + +LI++ED+E++ LA+ +LN + K C IK PGFGE+RKA L D+A G+V T Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLIIIYEKKISS---INAVVKVLELALKKQRPLLIVSEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKAGLQDLAVLTGGQVIT 333
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 3.167e-37 Identity = 95/222 (42.79%), Postives = 136/222 (61.26%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIANSPMGKVWTG------KDFECLSLGPPEKNYGIKEPNVI 839 D R+G MA+DA+V NL A+ I++ E+IA GT +ANG+R IGELIAKA EK + +AD T + EL++ GM LDRGY+SPYFITN KT++C L DP I+I +KKV+N + ++ + +LI+AED+E++ L + ++N + K C +K PGFGE+RKA L D+A G+V T ++FE LG +K K+ VI Sbjct: 148 DLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKTQKCELEDPLILIHDKKVTN---MHAVVKVLEMALKKQKPLLIVAEDVESEALGTLIINKLRAGIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLENFEPHMLGTCKKVTVSKDDTVI 365
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.137e-37 Identity = 90/192 (46.88%), Postives = 127/192 (66.15%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIANSPMGKVWT 767 D R+G MA+D++V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++D KT + EL++ GM LDRGY+SPYFITN K ++C L DP I+I EKK+S+ + E+ R+ +LI++ED+E+D LA+ +LN + K C IK PGFGE+RKA L D+A G++ T Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLILIHEKKISSINSVVKVLELALKRQ---RPLLIVSEDVESDALATLILNKLRAGIKVCAIKAPGFGENRKAGLHDLAVLTGGQLIT 333
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.681e-36 Identity = 86/192 (44.79%), Postives = 123/192 (64.06%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIANSPMGKVWT 767 D R+G MA+DA+V NL A+ I++ E+IA GT +ANG+R IGELIAKA EK + +AD T + EL++ GM LDRGY+SPYFITN K ++C L DP I+I +KKV+N + ++ + +LI+AED+E++ L + ++N + K C +K PGFGE+RKA L D+A G+V T Sbjct: 148 DLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTN---MHAVVKVLEMALKKQRPLLIVAEDVESEALGTLIINKLRAGIKVCAVKAPGFGENRKANLQDLAILTGGEVIT 335
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 3.068e-32 Identity = 83/185 (44.86%), Postives = 117/185 (63.24%), Query Frame = 3 Query: 186 VPDQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIA 740 V D R G MAI A+V +L S A I++ E+I T +ANG+R IGELIA+A EK + +AD T + EL++ GM L RGY+SPYFIT+ KT++C L +P I+I EKK+S+ + L ++ + +LI+AED+E+D LA +LN K C IK PGFG++RKA+L D+A Sbjct: 143 VMDLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATISANGEREIGELIARAMEKVGKEGVITVADGNTLDN-ELEVVEGMKLARGYISPYFITDEKTQKCELENPIILIHEKKISD---INSLLKVLEAAVKSSRPLLIVAEDVESDALAMLILNKHHGGLKVCAIKAPGFGDNRKASLDDLA 323
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.597e-31 Identity = 82/193 (42.49%), Postives = 114/193 (59.07%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRR---YNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIANSPMGKV 761 D ++G +A+DA+VG L + A+ I++ +IA GT +ANGD IG +A+A EK + + + KT + EL++ GM DRGYLSPYF+TN L DPYI+I EKK+SN L + PV +G +LIIAED+E + LA+ V+N + K +K PGFG+ RKA L DIA G V Sbjct: 115 DLKRGIDLAVDAVVGELKANARKISNNSEIAQVGTISANGDAEIGRYLAEAMEKVGNEGVITVEEAKTAET-ELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDPYILIHEKKLSN------LQSMLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTAGTV 300
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.430e-31 Identity = 91/238 (38.24%), Postives = 135/238 (56.72%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIA--KAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIANSPMGKVWT---GKDFECLS---LGPPEKNYGIKEPNVIPSFEGWPRNPKNLL 881 D R+G ++A+D +V L S A+ I++ E+IA GT +ANGDR EL+ KA E + + D KT + EL++ GM +DRGY+SPYFITN K ++C L DP I+I EKK+SN + + ++ + + +LI+A D+E+D LA +LN + K C +K PGFGE+RKA + D+A +V T G + E + LG +K K+ V F GW K + Sbjct: 149 DLRRGIKLAVDTVVTKLKSRARMISTSEEIAQVGTISANGDR---ELVTDCKAMESVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNQKNQKCELEDPLILIHEKKISN---LNSMVKVLELALKSQRSLLIVAADLESDALAVLILNKLRAGIKVCAVKAPGFGENRKANMHDLATLTGAQVITEELGMNLEKIDLSMLGNCKKITVSKDDTV---FLGWGAGDKKAI 376
BLAST of DY260422 vs. ExPASy Swiss-Prot
Match: CH603_SINMW (60 kDa chaperonin 3 OS=Sinorhizobium medicae (strain WSM419) GN=groL3 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.557e-31 Identity = 81/186 (43.55%), Postives = 110/186 (59.14%), Query Frame = 3 Query: 192 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRR---YNGTDVLIIAEDIENDLLASPVLNGVATATKACVIKPPGFGESRKATLPDIA 740 D ++G +A+DA+V L S A+ I+ +IA GT +ANGD IG +A+A EK + + + KT + EL++ GM DRGYLSPYF+TN L DPYI+I EKK+SN L I PV +G +LIIAED+E + LA+ V+N + K +K PGFG+ RKA L DIA Sbjct: 115 DLKRGIDLAVDAVVKELKSNARKISQNSEIAQVGTISANGDTEIGRYLAEAMEKVGNEGVITVEEAKTSDT-ELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDPYILIHEKKLSN------LQSILPVLEAVVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIA 293 The following BLAST results are available for this feature:
BLAST of DY260422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260422 ID=DY260422; Name=DY260422; organism=Citrus clementina; type=EST; length=1207bpback to top |