DY260537

Overview
NameDY260537
Unique NameDY260537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1049
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260537 vs. ExPASy Swiss-Prot
Match: PUR_ARATH (Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana GN=PURA1 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.800e-46
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 3 
Query:  150 NDVELVCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVNSDDHELFSKELQLDSKVFYFDIGENRRGRFLKV 434
            +DVELV KTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVNS++HELFSKELQLDSKVFYFDIGENRRGRFLKV
Sbjct:   27 SDVELVSKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVNSEEHELFSKELQLDSKVFYFDIGENRRGRFLKV 121
The following BLAST results are available for this feature:
BLAST of DY260537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PUR_ARATH1.800e-4695.79Transcription factor Pur-alpha 1 OS=Arabidopsis th... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAP12YN01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260537 ID=DY260537; Name=DY260537; organism=Citrus clementina; type=EST; length=1049bp
CAAAGTGAAGGAGACCCCTTTTAAAGTTAATTGGAGCCATTTCATTTTCT
TTTTATATCAATAGGATGGAAGGGAATTCAGGCGGAGGAGGAGCAGGAGC
AGGAGGGAGTGGGGGCGTTACCGGTGGTGGTGCAGGAGGCGGCGGAGGGA
ATGACGTGGAACTTGTGTGCAAGACATTGCAGGTAGAGCATAAGCTATTT
TACTTCGATCTCAAAGAGAACCCACGTGGGCGTTACTTGAAAATCTCTGA
AAAGACTTCAGCAACTAGGTCCACTATCATTGTTCCTTCTTCCGGCATTT
CTTGGTTCCTCGATCTCTTTAACTACTATGTCAATTCAGATGATCACGAA
CTCTTCAGCAAGGAATTGCAGCTCGACTCTAAGGTTTTTTACTTTGACAT
TGGCGAAAACAGAAGGGGTCGTTTCTTGAAGGTATGCTTGCTATCGGCTT
TGCCCCCCACTTTAAAAAAAGTGTTTAACGTTTTCTATTTTAACCATGTT
TTAATTGCTATATTGTTATGTGTCTTCATTGTTGTAAGAATTGCTTATAT
GACTATTCCAAGCATGAAGATATTTTCTCATGTCGACGGGCCACCAGTTT
GCCCTTTCCAATTTTTCCATTTCCAAAATTTACATTTTTCCTTTTAACAG
AAACAATAAGTTATTTGAACATTTTTATTGCCCCCCAGTAGATTTTTTAA
TTCCTTCCGCCTGGTAATTCCGAAAGGCCGAAATGGGGAAAAAAAAATAA
TCTAAGGGGCTGGGGGGCCGCCGCCACCAGGGGAAAAATGGCCTTGGCCG
AACAAAGGCCAAGCCCCCAAAAAAATAACCCCCTTGGAACCCCTTTTTCC
CCCCCATAACCCCCCCCCCAAAAACAAAAAACCCCCCCCCCCTTTAAAAT
TTCGCGGCAACCCGGGGAAAAAAAAAAGGTCCCCCTGCGAAATTTTTCCC
TCCCGGGCGTTCGAAACACGCCCCCCCTTTCCCCGCGGTTTGCTTTCCCA
ACAGGACATGTCCCCACCACGGTGCGACCCCCCTATATCTATTGGGGGG
back to top