DY260541

Overview
NameDY260541
Unique NameDY260541
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1229
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: NDRA_DICDI (Probable serine/threonine-protein kinase ndrA OS=Dictyostelium discoideum GN=ndrA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.416e-32
Identity = 80/207 (38.65%), Postives = 128/207 (61.84%), Query Frame = 1
Query:  217 GSGKKKEAGGNGSNEEST----DEEALSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            GS  ++E   N  +EE T      + LS  T  +  AAK YIE +Y    ++++ER +RR  LE KL +  +S ++ N+L K L+KKE++YMR++R K+   DFE++ +IG+GAFGEV + R + +  +YAMK+LKKSEM ++    HVRAER+ LA  ++N +++ + S Q++ +LY  +E    G+       K +  TEN+ +F
Sbjct:   12 GSDDERE---NFEDEEDTTTVYSSDPLSRPTMDRSLAAKMYIEQYYINAQQSVKERGQRRKDLELKLENMKLSSKESNDLRKELDKKESDYMRIKRLKLKRSDFEVIRIIGRGAFGEVSLVRHRESNDLYAMKRLKKSEMLKKEQAAHVRAERDVLASANTNWVVKLYYSFQDDNYLYLIMEYLPGGDM-MSLLIKYDIFTENQARF 214          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: STK38_PONAB (Serine/threonine-protein kinase 38 OS=Pongo abelii GN=STK38 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.261e-30
Identity = 75/187 (40.11%), Postives = 116/187 (62.03%), Query Frame = 1
Query:  265 STDEEALSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            ST   ++SN TK++V   K  +EN Y   +   +ER  R+  LEK + +  + +E++        +KETE++RL+R ++G +DFE L +IG+GAFGEVR+ ++K TGHVYAMK L+K++M  +  V H+RAER+ L E DS  +++   S Q++  LY  +E    G+       KK+TLTE + QF
Sbjct:    6 STPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDM-MTLLMKKDTLTEEETQF 191          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: STK38_MOUSE (Serine/threonine-protein kinase 38 OS=Mus musculus GN=Stk38 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.261e-30
Identity = 75/187 (40.11%), Postives = 116/187 (62.03%), Query Frame = 1
Query:  265 STDEEALSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            ST   ++SN TK++V   K  +EN Y   +   +ER  R+  LEK + +  + +E++        +KETE++RL+R ++G +DFE L +IG+GAFGEVR+ ++K TGHVYAMK L+K++M  +  V H+RAER+ L E DS  +++   S Q++  LY  +E    G+       KK+TLTE + QF
Sbjct:    6 STPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDM-MTLLMKKDTLTEEETQF 191          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: STK38_HUMAN (Serine/threonine-protein kinase 38 OS=Homo sapiens GN=STK38 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.261e-30
Identity = 75/187 (40.11%), Postives = 116/187 (62.03%), Query Frame = 1
Query:  265 STDEEALSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            ST   ++SN TK++V   K  +EN Y   +   +ER  R+  LEK + +  + +E++        +KETE++RL+R ++G +DFE L +IG+GAFGEVR+ ++K TGHVYAMK L+K++M  +  V H+RAER+ L E DS  +++   S Q++  LY  +E    G+       KK+TLTE + QF
Sbjct:    6 STPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDM-MTLLMKKDTLTEEETQF 191          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: ST38L_HUMAN (Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 3.857e-30
Identity = 72/181 (39.78%), Postives = 113/181 (62.43%), Query Frame = 1
Query:  283 LSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            +SN T+++V  AK  +EN Y   +   +ER  R+  LE  + +  +++E++        +KETE++RL+R ++G DDFE L +IG+GAFGEVR+ ++K TGH+YAMK L+KS+M  +  V H+RAER+ L E D   +++   S Q++  LY  +E    G+       KK+TLTE + QF
Sbjct:   13 MSNHTRERVTVAKLTLENFYSNLILQHEERETRQKKLEVAMEEEGLADEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKSDMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDM-MTLLMKKDTLTEEETQF 192          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: STK38_BOVIN (Serine/threonine-protein kinase 38 OS=Bos taurus GN=STK38 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 8.592e-30
Identity = 74/187 (39.57%), Postives = 116/187 (62.03%), Query Frame = 1
Query:  265 STDEEALSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            ST   ++S+ TK++V   K  +EN Y   +   +ER  R+  LEK + +  + +E++        +KETE++RL+R ++G +DFE L +IG+GAFGEVR+ ++K TGHVYAMK L+K++M  +  V H+RAER+ L E DS  +++   S Q++  LY  +E    G+       KK+TLTE + QF
Sbjct:    6 STPCSSMSSHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDM-MTLLMKKDTLTEEETQF 191          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: CBK1_KLULA (Serine/threonine-protein kinase CBK1 OS=Kluyveromyces lactis GN=CBK1 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 8.592e-30
Identity = 75/196 (38.27%), Postives = 118/196 (60.20%), Query Frame = 1
Query:  187 QKLQPRDKMRGSGKKKEAGGNGSNEESTDE--EALSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGE 768
            Q+ Q + + +   + ++  G+ +N    +   + L+  T+ K AA K  IEN Y+  +    ER +RR  LE +LA  D SEE +N  L  L KKE++++RL+R ++  DDF  + +IGKGAFGEVR+ ++K TG +YAMK L KSEM  +  + HV+AER+ LA  DS  ++  + S Q+ ++LY  +E    G+
Sbjct:  192 QQGQRQTQQQSQQQAQQQNGSANNYMYFERRPDLLTKTTQDKAAAVKLKIENFYQSSVGYAIERNQRRLELESELASQDWSEERKNRQLASLGKKESQFLRLRRTRLSLDDFNSVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMYNKDQLAHVKAERDVLAGSDSPWVVSLYYSFQDSQYLYLIMEFLPGGD 387          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: TRC_DROPS (Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.914e-29
Identity = 76/193 (39.38%), Postives = 115/193 (59.59%), Query Frame = 1
Query:  253 SNEESTDEEAL--SNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            S+   TD  ++  S+ T  K   AK  +EN+Y   +    ER++R   LE +L D  ++E  +        +KETEY+RL+R ++G +DFE L +IG+GAFGEVR+ ++K TGHVYAMK L+K++M  +  V HVRAER+ L E D   +++ + S Q++  LY  +E    G+       KK+TL+E   QF
Sbjct:    3 SSRTDTDGSSIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLTESQRQEKRLQHAQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQDQVNLYLIMEFLPGGDM-MTLLMKKDTLSEEGTQF 194          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: SAX1_CAEEL (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.914e-29
Identity = 72/188 (38.30%), Postives = 112/188 (59.57%), Query Frame = 1
Query:  262 ESTDEEALSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            E   E  +S  TK K +  +  IE++Y +++    ER  R   LE+ ++   +S+E++    K    KET+Y+RL+R ++  +DFE L +IG+GAFGEVR+ ++  TGH+YAMK L+KSEM  +    HVRAER+ L+E D + +++ + S Q+   LY  +E    G+       KK+TLTE   QF
Sbjct:    3 EIAPEMEISQYTKDKASCTRISIESYYSKRVTQCAERENRLKKLEEDISARGLSDEEKEEKRKIHHSKETDYLRLKRTRLTVNDFESLKVIGRGAFGEVRLVQKHDTGHIYAMKILRKSEMVEKEQTAHVRAERDILSEADCDWVVKMYYSFQDYSNLYLVMEFLPGGDM-MTLLIKKDTLTEEATQF 189          
BLAST of DY260541 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.264e-29
Identity = 70/181 (38.67%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  283 LSNVTKQKVAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMPRRGTVEHVRAERNPLAEVDSNCLLQPHLSLQEEEFLYPNLEITTLGEK*RPYPTKKETLTENKPQF 825
            +SN T+++V  AK  +EN Y   +   +ER  R+  LE  + +  +++E++        +KETE++RL+R ++G DDFE L +I +GAFGEVR+ ++K TGH+YAMK L+K++M  +  V H+RAER+ L E D   +++   S Q++  LY  +E    G+       KK+TLTE + QF
Sbjct:   13 MSNHTRERVTVAKLTLENFYSNLILQHEERETRQKKLEVAMEEEGLADEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIARGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDM-MTLLMKKDTLTEEETQF 192          
The following BLAST results are available for this feature:
BLAST of DY260541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
NDRA_DICDI2.416e-3238.65Probable serine/threonine-protein kinase ndrA OS=D... [more]
STK38_PONAB2.261e-3040.11Serine/threonine-protein kinase 38 OS=Pongo abelii... [more]
STK38_MOUSE2.261e-3040.11Serine/threonine-protein kinase 38 OS=Mus musculus... [more]
STK38_HUMAN2.261e-3040.11Serine/threonine-protein kinase 38 OS=Homo sapiens... [more]
ST38L_HUMAN3.857e-3039.78Serine/threonine-protein kinase 38-like OS=Homo sa... [more]
STK38_BOVIN8.592e-3039.57Serine/threonine-protein kinase 38 OS=Bos taurus G... [more]
CBK1_KLULA8.592e-3038.27Serine/threonine-protein kinase CBK1 OS=Kluyveromy... [more]
TRC_DROPS1.914e-2939.38Serine/threonine-protein kinase tricorner OS=Droso... [more]
SAX1_CAEEL1.914e-2938.30Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
ST38L_MOUSE4.264e-2938.67Serine/threonine-protein kinase 38-like OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YN08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260541 ID=DY260541; Name=DY260541; organism=Citrus clementina; type=EST; length=1229bp
GAAATCAAAATACTAAAAATATAAGTAAAATTGAAAAAAAAAAAATTTAT
TTGTTTCAGTTTTTGGTGGATCTCATCATCAACGACACAAATTTCGCGAC
TGTATGCAATTGAGTGGTTTCTGAATTTGAGATGCTATTATAGTAGTTAA
AAGTGAGAGAATATGGACTCGGCGAGGAGTTGGTTGCAGAAGCTGCAACC
GCGAGATAAGATGAGAGGTTCGGGGAAGAAGAAGGAGGCTGGTGGCAATG
GAAGCAACGAGGAGTCAACCGATGAAGAAGCTTTGTCCAATGTTACCAAG
CAGAAGGTTGCGGCGGCTAAGCAGTATATTGAAAATCATTACAAGGAGCA
AATGAAGAATCTTCAGGAGAGAAGGGAGAGGCGAAATATACTGGAAAAAA
AGTTGGCTGATGCTGATGTATCTGAGGAAGATCAAAATAACCTACTTAAG
TTCTTGGAGAAGAAGGAAACTGAATATATGCGTCTTCAGAGGCATAAAAT
GGGTGCTGATGATTTTGAATTGCTGACAATGATTGGAAAGGGGGCATTTG
GGGAGGTTAGAGTTTGTAGGGAAAAGACAACTGGTCATGTATATGCTATG
AAAAAGCTTAAGAAATCTGAGATGCCTCGGAGAGGAACGGTTGAGCATGT
AAGAGCCGAAAGGAATCCTCTTGCTGAGGTTGATAGCAATTGCCTCCTCC
AACCCCACCTGTCCCTTCAAGAAGAAGAATTTCTTTATCCAAACCTGGAA
ATAACCACCCTGGGGGAAAAATGAAGACCTTACCCTACAAAAAAGGAAAC
CTTGACCGAAAATAAACCCCAATTTAAGTTGCCAAAACATTTTTGGCTTT
TGAGTCCATCCCTAAAACACCCTTAAATCCCTACAAAAAATCACCCCCCC
ACCACCTGCGCCCGAGAAAAAAACGGCCCCCCCACCACCCCCCTAACTTT
TGGACCCCCTATAACCCCCCTAAAATGTCCTATCCCCCCCCACACCACAC
AATTCTTCACCAGTGGGAAAACACCCCCAACCGGTGCCCCTCCCACAAAC
AAGAGAAACCCCCCCGCCCCCCCCCCACCACCCCCCCCCCCAAAACAAAA
CACACTAACCCCCCCACACTGGCAACCAACACAACAAAAAGAAAAACACC
TCTCGCTCTTTCCTCCCCCCCGCCGCCCTGCACCACCCCCCCCCAATCCC
ATCCTTCTCCTCTCACCCAAGCGCCTACC
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